Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_30567 |
Symbol | |
ID | 4838287 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | + |
Start bp | 402610 |
End bp | 403437 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 12 |
GC content | 44% |
IMG OID | 640389602 |
Product | predicted protein |
Protein accession | XP_001383354 |
Protein GI | 150864512 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.800594 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.92709 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCCTC CTACCAGACC TACCAGTGCC GGGGCTAGAC TCCAGAAACT TGCATTAACA CAACAGTTCT ACTGGTTCCT TGGTCATGTG ATGGCCGTTC TCTTTTTTGC AGTTTCCACC ATCAGTTCGT TTATCTTTCC TCGTTCATCG CTTAAGTACT ACAGGTTTTC GCTTTTATCG ATCCTCGTGA CTTACGTCAT TGTGATCAAG CAGATTTACC TTCGTAAGCT TCTGACTGTG ACAGCCACTC GTCTCATTCG TGACGAAAAC GTCCAGTACT TTGTTCTTGC TGGAGTGTTC TACTTGGCTT CCTTCAAGAT AGGCGTCGTG GCTGGTTCGC TTTACTCATT TGCCATTTTT GCTGTGTTTC ACATTCTCAC ATACTTTCAG AACAACTTGT TGTCGATTGT ATTGGCCAAT CCTCAGGCTC AACAGCAGGT GAATGCCACT ATCAACCAGT TTACCACTAA CTACAACCAG CAGGCACTTA TAGTTGCAGC CAATGCTGAA GCCATGCTTC TCGTGTTGAA CGTTTTCCTG GTTTTCCTGG CATTTTTGTT CAACTTGGTG CTCCAACGTG ACATTGTCTA CTTCTTGGTC AAGTTATGGG TAGCTGCTAT AACTGTAGTG TTTGTAAAGT TCAGATTCGA CTCTAACCAG TACACCAAGC TTGTAATCCA ACAGTTTGAT CTCAAGATCA GCGAATTGTT GGCAAGATTC AACAGTACAG CCTTGAACAA CTTGTACAAT GTCTCGTTCA AGAGCCAATT CCTTCCTCAC TACATTGCAC CTATTCAAGT GCCCAAGGAA AACATCAAAA AGACATGA
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Protein sequence | MAPPTRPTSA GARLQKLALT QQFYWFLGHV MAVLFFAVST ISSFIFPRSS LKYYRFSLLS ILVTYVIVIK QIYLRKLSTV TATRLIRDEN VQYFVLAGVF YLASFKIGVV AGSLYSFAIF AVFHILTYFQ NNLLSIVLAN PQAQQQVNAT INQFTTNYNQ QALIVAANAE AMLLVLNVFS VFSAFLFNLV LQRDIVYFLV KLWVAAITVV FVKFRFDSNQ YTKLVIQQFD LKISELLARF NSTALNNLYN VSFKSQFLPH YIAPIQVPKE NIKKT
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