Gene PICST_30558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_30558 
Symbol 
ID4837976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp379292 
End bp381100 
Gene Length1809 bp 
Protein Length602 aa 
Translation table12 
GC content44% 
IMG OID640389291 
Productpredicted protein 
Protein accessionXP_001383701 
Protein GI150864740 
COG category[R] General function prediction only 
COG ID[COG0661] Predicted unusual protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0158618 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCTAT TGAAATGCAA CTTTCCACAT CATGTTTTTC TTCTACAGTT ACGCAAAAAG 
ATGGTTTTGA CGACACGTAT AGGCACAGCT TGTGCTGTGA CCCGTCACAG TGTCGGACCG
ATGGCAGTCG GTTTCCGAGG GATGAGTCCC CGTATCTCGT CATCTCTCAC AAGACGTTTC
TCAACCTTTG CCAGATCTGG CCCCAAGCCT AGATCTTTCA AAAGGATGTT CACAGTAGGT
GTAGCACTTG GCTTAGGAGG CTCGGCATTA TACTACACTA ACGACAATGT CCGTCACGTG
GTTCTTACGG CAGAAAGGGT CACGGTGGTG ACAGTTGCTG TCTTCAGGTG TTTCAACATG
TACTTACAAA CGCTTGGGAA GGACTACGAG TCCCGTGAAG AGCGCTCCAA GGCGTTAAAG
AAGACCCACA AGCGAGCAGC TGATATCACC TTGAGAGCCT TAGAGACGAA TGGAGGTATC
TACATCAAGT TGGGTCAGCA TATCACTGCC CTTACCTATT TATTGCCTAG AGAATGGACA
GATACAATGA TACCCTTACA AGATCAGTGT CCTCGTTCGT CCATGGAGGA GATCGAGAAA
ATGTTTGTCA ACGATTTGGG TACCTCAGTG AATGATATGT TTTCAGAGTT TGATCCAGAA
CCGGTCGGTG TAGCCTCTTT GGCACAAGTC CATATAGCAA CGCTCAGAGA GTCGGGCGAA
AAAGTGGCTG TCAAGATCCA GCACCCTTCC TTGCAAGAAT TTGTTCCTCT TGATGTTTTC
TTGACGAAGA CCGTGTTTGA GTTGATGTAC AAGTTTTTCC CAGAATACCC CCTCACCTGG
CTTGGTGAAG AAATGCAGAG CTCTATCTTT ATCGAATTGG ACTTTACAAA AGAAGCAGAA
AATGCTCAAA AGACGGCTGC TTACTTCAAG GACCTCAAGA GAGAGACTGC TTTGAAAGTT
CCTAAGATTG TCGAAGCTCA GCAAAGAATA TTGATTATGG AATATGTAGG AGGTGCCAGA
TTAGACAACC TCGATTATTT ACGAGAACAC AACATTTCTG CCGCCGATGT TTCGTCGTGT
TTGTCACACA TATTCAACGA CATGATCTTC ACGCCAGGCG TAGGATTACA CTGTGATCCT
CATGGAGGTA ACTTGGCTAT TAGAGCTCTA GAAAACTCGG AATACAAGAA CGGCCATAAC
TTTGAAATCA TCTTATATGA CCATGGTTTG TACAGAGATA TACCGGTTCA GATGAAACGT
GATTACTCTC ACTTCTGGTT GGCTGTTCTT GATAGTGATG TGCCCAAAAT GAGAGAGTAC
GCTGAGAAGT TTGCTGGAAT ACAAGGCGAT CAAAAGTTCA GAATCTTTGT CTCTGCCATC
ACCGGAAGAG CTCCAGAAAA TGCATTGAAC GACATCAAGA AACTGAGATC CGAAGAAGAA
ATTAGGATCA TCCAAAACGA GTTGAACTAC CTGGAAGGTG TTCTTGAAGA CTTGATGGAT
ATCTTAAGTT CTATGCCGAG AATGGTGTTG TTGATTCTCA AGACAAATGA CTTAACAAGG
AGCTTGGATG AGAATTTGAA CAACCCCTTG GGACCTGAGA GAACCTTTTT GATTTTGGCA
AATTACTGCG CTCGTGTAGT TTACGACGAA GAAAACGAGA AAATAGCCAA GGAGTACAAA
TCGTATTCGG TAAAAAAATT TGTTCATTAC TTGACCAACT GGTGGTCCTA CCACAAAAGA
ACTAGCCAAT TGTTCCTTTA TGACTTTATC GTCATGCTAC GCAACGCTAG AAGGAGACTC
TCCTTGTAA
 
Protein sequence
MALLKCNFPH HVFLLQLRKK MVLTTRIGTA CAVTRHSVGP MAVGFRGMSP RISSSLTRRF 
STFARSGPKP RSFKRMFTVG VALGLGGSAL YYTNDNVRHV VLTAERVTVV TVAVFRCFNM
YLQTLGKDYE SREERSKALK KTHKRAADIT LRALETNGGI YIKLGQHITA LTYLLPREWT
DTMIPLQDQC PRSSMEEIEK MFVNDLGTSV NDMFSEFDPE PVGVASLAQV HIATLRESGE
KVAVKIQHPS LQEFVPLDVF LTKTVFELMY KFFPEYPLTW LGEEMQSSIF IELDFTKEAE
NAQKTAAYFK DLKRETALKV PKIVEAQQRI LIMEYVGGAR LDNLDYLREH NISAADVSSC
LSHIFNDMIF TPGVGLHCDP HGGNLAIRAL ENSEYKNGHN FEIILYDHGL YRDIPVQMKR
DYSHFWLAVL DSDVPKMREY AEKFAGIQGD QKFRIFVSAI TGRAPENALN DIKKSRSEEE
IRIIQNELNY SEGVLEDLMD ILSSMPRMVL LILKTNDLTR SLDENLNNPL GPERTFLILA
NYCARVVYDE ENEKIAKEYK SYSVKKFVHY LTNWWSYHKR TSQLFLYDFI VMLRNARRRL
SL