Gene PICST_30557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_30557 
Symbol 
ID4837947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp378662 
End bp379171 
Gene Length510 bp 
Protein Length169 aa 
Translation table12 
GC content39% 
IMG OID640389262 
Productpredicted protein 
Protein accessionXP_001383350 
Protein GI126133651 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00983902 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGCATTTG ACAAACCAGG AAGAGGAGGC AAAAGCTTCA GAGGAAAGAG CAGAAGCTCT 
TACGTGGATA TGCGTGAGAC AAAATCTAGG GATATCAAGA AAGCATTAAC TCATAGAGCC
AGATTGAGAA AGAGTTACTT CAAATTGTTA GAAAAGGAAG GAATGAGCAC TCCAAGAGAT
GAAATAGATA ACACTAGCAT TTACCAATTA GAGAGTGGCG AAGACGAAGC AGATCAAATA
CAAGAAAGAA GAGAAAGAAA ACCTTTGCCA AAACAGGAAA AGGTGAAACC TATGAACTTT
GCTGAAAGGG CCAAGATAGC CAAGCAGAGA AAGGAAGAAA ACAGAAAGGC AAAGTTGGAA
GATGTAAGAG AAAGACGCCA AACCATAGAA AGAAAGAATA GAGAGAGGGA AAAGAGAAAA
GAAAGAATAT CCCAGACCAC CAAGACTGGA CAACCACGTA TGGGTCCTAG AATCAATAAT
TTATTGGACA AAATCAAGAA GGATATGTGA
 
Protein sequence
MAFDKPGRGG KSFRGKSRSS YVDMRETKSR DIKKALTHRA RLRKSYFKLL EKEGMSTPRD 
EIDNTSIYQL ESGEDEADQI QERRERKPLP KQEKVKPMNF AERAKIAKQR KEENRKAKLE
DVRERRQTIE RKNREREKRK ERISQTTKTG QPRMGPRINN LLDKIKKDM