Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_30557 |
Symbol | |
ID | 4837947 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | + |
Start bp | 378662 |
End bp | 379171 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 12 |
GC content | 39% |
IMG OID | 640389262 |
Product | predicted protein |
Protein accession | XP_001383350 |
Protein GI | 126133651 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00983902 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGCATTTG ACAAACCAGG AAGAGGAGGC AAAAGCTTCA GAGGAAAGAG CAGAAGCTCT TACGTGGATA TGCGTGAGAC AAAATCTAGG GATATCAAGA AAGCATTAAC TCATAGAGCC AGATTGAGAA AGAGTTACTT CAAATTGTTA GAAAAGGAAG GAATGAGCAC TCCAAGAGAT GAAATAGATA ACACTAGCAT TTACCAATTA GAGAGTGGCG AAGACGAAGC AGATCAAATA CAAGAAAGAA GAGAAAGAAA ACCTTTGCCA AAACAGGAAA AGGTGAAACC TATGAACTTT GCTGAAAGGG CCAAGATAGC CAAGCAGAGA AAGGAAGAAA ACAGAAAGGC AAAGTTGGAA GATGTAAGAG AAAGACGCCA AACCATAGAA AGAAAGAATA GAGAGAGGGA AAAGAGAAAA GAAAGAATAT CCCAGACCAC CAAGACTGGA CAACCACGTA TGGGTCCTAG AATCAATAAT TTATTGGACA AAATCAAGAA GGATATGTGA
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Protein sequence | MAFDKPGRGG KSFRGKSRSS YVDMRETKSR DIKKALTHRA RLRKSYFKLL EKEGMSTPRD EIDNTSIYQL ESGEDEADQI QERRERKPLP KQEKVKPMNF AERAKIAKQR KEENRKAKLE DVRERRQTIE RKNREREKRK ERISQTTKTG QPRMGPRINN LLDKIKKDM
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