Gene PICST_30556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_30556 
Symbol 
ID4838312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp377397 
End bp377990 
Gene Length594 bp 
Protein Length197 aa 
Translation table12 
GC content42% 
IMG OID640389627 
Productpredicted protein 
Protein accessionXP_001383349 
Protein GI150864511 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0863571 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.011318 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCGAC CCCAGGGCCA AGATCTAAGC TCGCAGTCTT CCACAACTAT TCTCTGTGGA 
ATATGCCATC AGAACACATC TAATTATGCA TGCCCACAAT GTAAGATATT ATACTGTTCC
ATGGTGTGTT TCAAGTCGCC AGAGCATGAA AGCTGCTCCA AACAGTTCCT CAAGAAAAAC
GTAGAAAGCT CGGAAACAGA AACGGCTTCC CAGAAGAAAA TGCTAGAGAT ATTAGATAAA
TACACTATGG AAGACGATCA ACAAGACGAT TATGTAGAAA AGGAGCCTAA AAGACAATGG
AAATACGTGC CTCCAGAAAG CACTGCTAAG CAGATAGAAG AATTGAAAAC GAAATTTGGC
TTCTCTGGTC TGAAGAAGAA TACCTTTGAA CATGAGCCAT CGAATGATCT GGACAGCGAC
AAAACCGACC ATGAACTTAC AGCACAAGAA GAAAGGGAGT TGGAAGAACT TGTCAATGGG
GCTACGGAGG AGCAACTTTT GCAAATTCTT TCTCCAGAAC AGCTAAGACA ATTTCAAGAT
TTAATTGAAA ACGGCTACTA CGAGGACGCA GATAGTGATG ACGACTACGA ATAG
 
Protein sequence
MLRPQGQDLS SQSSTTILCG ICHQNTSNYA CPQCKILYCS MVCFKSPEHE SCSKQFLKKN 
VESSETETAS QKKMLEILDK YTMEDDQQDD YVEKEPKRQW KYVPPESTAK QIEELKTKFG
FSGSKKNTFE HEPSNDSDSD KTDHELTAQE ERELEELVNG ATEEQLLQIL SPEQLRQFQD
LIENGYYEDA DSDDDYE