Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_30528 |
Symbol | |
ID | 4837954 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | + |
Start bp | 289711 |
End bp | 290760 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 12 |
GC content | 40% |
IMG OID | 640389269 |
Product | predicted protein |
Protein accession | XP_001383336 |
Protein GI | 150864499 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTTCTA TACTAAATCT ACCCCATGAG GTGATGGTGA AAGTGTTCAA GTACTTGACG CCGAGCGAGA CCAGTCAGAT GATCAAGAAG TTGAAATCGG ATAAAGAACA CCGAGGTCGG CTTGATGATC TTGTCATACG ACTCTTGTAC CAGCGTCTTT TCAATGGGAA GTTGATGATT ATCAACGACA AATCGAACGA GACTATTGAA TACGACACTA TGCTCACTAT AGATTCGTTT GAAGAGCGCT TTTTGGTACA TAACTACGAG AACTTGTTGT TCCAGGAGAT AAGACCAAAC TATGTAGAGG TGAAATTCAC CAGACAGGCC AATGATTACA TGAATTTCAT AGGAAATTTG TACAAGTTCT TCAGTCTCTT GTCTCGAGAG GAAAATGTGC AGATGCTCAA GTACTTCGAG ACGAAAATCT TGCAACTTGA CTTTTACACT GACGGAAATC TTGTATTGAT AGAGAATCCA ACATCATTAT CCACTATCAT CATCAAGATA TTGATCAGTT TGTCTAGCAA CAAGGACCTC TTGGGAAAGA TCAAACGGTT CACTATAAAG TCGACCGATA TCGGAAATCT TTACGTTTCC CAATGGAGTC AGCTATTCCG ACGTTTTATC AATTTGCATA CACTAGATCT ATCCAACGAC ATAATTCACT CTGATTATGA TGATTGCAGA GATGTTTTAG GTTATTCTTT CAAGTTTCCA GCCAGGCTTA AGATACTAGT GCTAGATAAC AATGTGTTGC GATATGTTTC GGTTGCAATG ATTGCTAGTC TTCCACATAG CCTAGAAGTG TTACTGTTGA GCCACAATAA AATCGTATCT GTAGAACCAG TACGTCTATC CTCAAAGTTA CCGAATCTCC GCTATTTGAA TCTCGACTAT AACGGCCGCT TACTGTTTTT GGACCCTGTC ATTTTCCGGG GCATTAGGCG AGACTTCAGA CTTCTGTTAA GGGGCACCAG TTTTGAGGAT GCTGATTTTT CGCATTTGGC AAGAGCGACT AGCGAGATCG GATTTACCAT TATAGTGTAA
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Protein sequence | MVSILNLPHE VMVKVFKYLT PSETSQMIKK LKSDKEHRGR LDDLVIRLLY QRLFNGKLMI INDKSNETIE YDTMLTIDSF EERFLVHNYE NLLFQEIRPN YVEVKFTRQA NDYMNFIGNL YKFFSLLSRE ENVQMLKYFE TKILQLDFYT DGNLVLIENP TSLSTIIIKI LISLSSNKDL LGKIKRFTIK STDIGNLYVS QWSQLFRRFI NLHTLDLSND IIHSDYDDCR DVLGYSFKFP ARLKILVLDN NVLRYVSVAM IASLPHSLEV LSLSHNKIVS VEPVRLSSKL PNLRYLNLDY NGRLSFLDPV IFRGIRRDFR LSLRGTSFED ADFSHLARAT SEIGFTIIV
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