Gene PICST_30527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_30527 
Symbol 
ID4838199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp288662 
End bp289504 
Gene Length843 bp 
Protein Length280 aa 
Translation table12 
GC content43% 
IMG OID640389514 
Productpredicted protein 
Protein accessionXP_001383335 
Protein GI150864498 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATATGA CGCCGGAAAT ATCGAAGAAG CGGGCATCTG AGTCTGACGA TATCTACTCC 
TACTCCAGTG GAAAAAGGAT CAGACTAGAT AACCTTTTTG ACGGACTTTC TCTAGGTGGA
GATAGACTGA GTCCAGAGCA GGAAAATAGC ATTAGAGAAG ATTTTGTCAT CAATCCCAAC
GTGGAAACGT ATTCCGTGTA TAAAAAGAAG ATTTCAAAAC CGAGAAGTAA TACTTCGTCA
GGAATCACCA GTGATTTCAG TAGCTATTTA GCAGAGAAAC TAGTTGACCA TTTCAACGAA
GAGATGCTTC GCAACCTCCA GGTGATCCCC TGGTACGACT ACAGATTCCT CGTGATCTAT
AGGTTTGAAA GATGGGCCGT CCGTCTTTTC AACCGCTTTC TCCGAGAATT CAACAAAAGA
AACAACCTCC GAATAGGGCC CATGCGTAAT TACGATAAAA TTCTCAAGCT TGTGGAAGAA
CAGAAAATCA CGGCTAACGA CTTGTTTAAT ATTCTCGACC AAATGTGCCA TGCAGAAATG
GCACAAATCG AAAAGAGGAA ATGGTACCGG TCTCAGAAAC AAGATGAATC TCACTTTGTA
GATGAAGCTG AGATACTAAA AGATACACGC TACGACTATT GGGACACGCT TAATATAGAC
CGAGACTCAG CTATGCTGGA AAACGAAGGA TATCGCAATG ATCTTACAGA TCTGAAGGTT
GAAGAACTAC CGCTTGATGA GCAGGATATG GAGATGGAAG ACTGGGGCGA TGACATCATG
GCAGACTACG GTTCCTATTA TGGCGAATAC AGAGACAACA ACAGCGAGCC AATGATGGCA
TAA
 
Protein sequence
MHMTPEISKK RASESDDIYS YSSGKRIRLD NLFDGLSLGG DRSSPEQENS IREDFVINPN 
VETYSVYKKK ISKPRSNTSS GITSDFSSYL AEKLVDHFNE EMLRNLQVIP WYDYRFLVIY
RFERWAVRLF NRFLREFNKR NNLRIGPMRN YDKILKLVEE QKITANDLFN ILDQMCHAEM
AQIEKRKWYR SQKQDESHFV DEAEILKDTR YDYWDTLNID RDSAMSENEG YRNDLTDSKV
EELPLDEQDM EMEDWGDDIM ADYGSYYGEY RDNNSEPMMA