| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_30516 |
|---|
| Symbol | |
|---|
| ID | 4837836 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009043 |
|---|
| Strand | + |
|---|
| Start bp | 260780 |
|---|
| End bp | 262297 |
|---|
| Gene Length | 1518 bp |
|---|
| Protein Length | 505 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640389151 |
|---|
| Product | conserved hypothetical protein |
|---|
| Protein accession | XP_001383332 |
|---|
| Protein GI | 150864495 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGATT ATACTGTTCT TCCCGATCCG GAGGATGTTG AAGCAGAGCC CGTTTTCTCA
GCCGATGGAA CACTTTTGAT CCACGTTGAA TCTGCTAAAG ACTTGCCTAA TCGCCGTAAA
CTTGACAAAC AGAACCCGTA TGTGACTCTT CGTATGGGTA CGACTGCAAA AAAGACCCCA
TCCATCTTTC GTGGGGGACA GAGGCCGACA TGGGATCACG ATCTCAAGTT TGAGATGTCG
CGAGAAAGGA AGCCCATTCT AATAATAGAC GTATTGGACG AGACAAAAAA CGAGCCCACG
CCTATTGGAC ATGTAGAAAT TGACTGCTCG ACTGTTTTGC ATCCCGACAA CGAAGTTAAT
GGAGAATATT TCTTGAAGGG ATGGTATGAC ATGACTTTGA ATGAGCGGAG AGCTGGTCAA
ATTCTTTTAG ACTTCGCTTT CTATCCGCAC GCTCCTCTTC TACCACCCAA AATTCCAGCA
AATCAGGACT ATGGTATGAC CCAAAGTTAT GACCATGGAG ACAGCCATAG AAGCAGTAAT
CTGTTTGACT CTAGAGGTGG ATATCTGCGT AGTGCCAGTC CCCAAAAGGA GCTTCCTCCA
TCTCCCAAAA TGAGAGCGCC TTCTGTGGCA GATCAGATTT TCGTTTCTGA AGACAACATC
AAGAAACAGA AGAAGTTCTC GCTTCTGTCT TCAAGTATCC AGGGCTTTTC GTCACATGCT
AATCGTGAAG TCTTTATAAA CGGCGCAGAT TCAGGTAAGA AACTGGGCAG ATTTTTCGAC
AAGTTGAACA AGATCAAAAG CAAGTTCAAT GTGTCTCGGG ACGACGCCAA CACTGTGTGG
TTAACTTCAG ATGCTCAGCT CACTGCAGAG TCTTCTCCTA GACGCTCAGC TTCGCCTATC
AGTTTGTTTG GACTGGATGA TGAGAACCAT GTGGATAGTT TAGGAACACC GGTAGTTCCA
CCTCATTCTG TGCATTCCAT GGATTCCAAC CAATTGCTGA CTTCAGCACG TAAAGAGGGT
CACTCCAGAT CACCACAACG AAAGCCACCT ACTGATCTCC AAGACGATTT CCGGAGCTTG
AACCTCAAGA AAAGCGTCTC TTCCATTCCT TTCTCCGCTG ATTCCATAGG TGATGATTAT
GGACATGTGC CGACAAAGGT ATACCTATGT GATGAGCCAG TAACGCCCCT AGACAAAAAT
AAGAATATCG ACGGTGATGA CATTGCAATC TTCCCAACCC CCAGAGATCA TTTCACCAAA
GAAAGAAGGC TCAAAGACGG ACACGGAGTC AAGGCTGAAG ATTTCAAAGT AGACTTTAGA
ACTGAGAAAA CAGGCTATTT AGGCGATGGA CGCTTTTCAC CGTCTGTATT CCAAAGAGTA
GACCATTTCG ACTATGCCGA AGATCTTGGA CCAAAGCCTA CTGTCCCTCC AAAGATACCC
AAGGGATTCA CGGCTCAGGA GTATTATGCT ACTGATAGAG AGAGTTATTT GAAGGATATA
AACGGTAAAA GATTTTAG
|
|---|
| Protein sequence | MADYTVLPDP EDVEAEPVFS ADGTLLIHVE SAKDLPNRRK LDKQNPYVTL RMGTTAKKTP
SIFRGGQRPT WDHDLKFEMS RERKPILIID VLDETKNEPT PIGHVEIDCS TVLHPDNEVN
GEYFLKGWYD MTLNERRAGQ ILLDFAFYPH APLLPPKIPA NQDYGMTQSY DHGDSHRSSN
SFDSRGGYSR SASPQKELPP SPKMRAPSVA DQIFVSEDNI KKQKKFSLSS SSIQGFSSHA
NREVFINGAD SGKKSGRFFD KLNKIKSKFN VSRDDANTVW LTSDAQLTAE SSPRRSASPI
SLFGSDDENH VDSLGTPVVP PHSVHSMDSN QLSTSARKEG HSRSPQRKPP TDLQDDFRSL
NLKKSVSSIP FSADSIGDDY GHVPTKVYLC DEPVTPLDKN KNIDGDDIAI FPTPRDHFTK
ERRLKDGHGV KAEDFKVDFR TEKTGYLGDG RFSPSVFQRV DHFDYAEDLG PKPTVPPKIP
KGFTAQEYYA TDRESYLKDI NGKRF
|
|---|
| |