Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_30511 |
Symbol | |
ID | 4838329 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | - |
Start bp | 250525 |
End bp | 251889 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 12 |
GC content | 45% |
IMG OID | 640389644 |
Product | predicted protein |
Protein accession | XP_001383678 |
Protein GI | 150864728 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACAG GTAAACCAAC TACACCGTTG TCTTCACCAA AAGTCACAGA CAAAAACAGC ATCAGACCGT CGACGCCTCC TCCATCATCG TCGGGAGACA ACTCGCTTCA TAGGATCTCA GCAAGCTACT TGAAAACGCC AGAACCGACC CTGGAAGTTC CGTTTTCACC ATCCTTGAAA CGTACAAATT CAGGCTCTTA CAAACTGCCT GACTATAAGT TAAACCACAA TAACGTGACC TCACCCTACA GCTCTGCAAA CTTGTTGAAG ACACCCAGAC ATACTGGCTA TGATTCTGCT GAAAGGCGTC TGAAACTCCA GAAGACTCCA CAGTACTTTT CCCCAGCCAA GAAGTTGTTC CAGAATGAAG ATGGTAGTCC CAATAAGGAA GATCTCACAG AGATAACGCT GCAGCTCAAA ACACGATTGA GTTCTGCATT GGGCAAGTTG CAACGGGACG ATTCATCTGC TTCAAGAAAT CACATCACTT TTACAGAATT GTCGTTTGAC TCAGAAACGT CGCCGACAAA GAAGCTGAAG CCGGAGTCTG ACAAAAAAGT ATGGTCGCCA TCAAATTCTC TCCAAAGAGC CAATCTAAAT CTCCAGACGT TACAACAATC GCCTCTTCCC AAGAACACTA CCTCACCTCA TTTGGTACAA CCTTCATCAT TTGTTTCCTC CAACTCAAAT TCTCCCTTGA AACAGTCCCC TTTTTTGCAT AATGATTTGG AAAATAGACC CTACCTAAAT ATGCCTTCGC CGGATGAAGA GTCCAGTGCC CACAATGCCT TGTTAGCGGC TTTGTCGAGG CAGAGGCGTA AGTCCAGATC TTCTTTTTCG CTGGGAACTA AACGCAGATC TTCTATAGTC ACGGCGAATG ATGAAGGATC AACTTTAATT CTTCAACAGC AACAGCCCAC AACTCCTAGT CAACAGCAGT CGGTAAAATT GCCTCCTCTA AACATAGCTC TAGGGAGTGA TATCAGAGGA GAACCCTACG GATCAGGGTT ACCTTCGTTT GAAGCTAAAG AGACTCGTAA AACTAACGAA CAGGACGCTG TATTGTCACT CATGTCGTTG TCATCACCAC AATCCATCAA ATTTGGCCAC AGTAGGAACC ACAGCCTTAA TAACAACAAT ACAACCACAT CTGTTTCTTC GCCTGGATCT TCCAGATCGT CACTGGTGAT AGTTCAGAGT CCACAGAACC CCCTTCCCCT GCCTATGCCT ATTCTTCCGC CCATCACCAG TTTGGTGAAT GAACAGAAGA AGAAGAAGAG AGTACCAACA GGACAGAACA TTGGCAATGC CATAGACTCA GATGCCACTG ATATAGATGA AGATGTGACA GACGATGAAA TATGA
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Protein sequence | MSTGKPTTPL SSPKVTDKNS IRPSTPPPSS SGDNSLHRIS ASYLKTPEPT SEVPFSPSLK RTNSGSYKSP DYKLNHNNVT SPYSSANLLK TPRHTGYDSA ERRSKLQKTP QYFSPAKKLF QNEDGSPNKE DLTEITSQLK TRLSSALGKL QRDDSSASRN HITFTELSFD SETSPTKKSK PESDKKVWSP SNSLQRANLN LQTLQQSPLP KNTTSPHLVQ PSSFVSSNSN SPLKQSPFLH NDLENRPYLN MPSPDEESSA HNALLAALSR QRRKSRSSFS SGTKRRSSIV TANDEGSTLI LQQQQPTTPS QQQSVKLPPL NIALGSDIRG EPYGSGLPSF EAKETRKTNE QDAVLSLMSL SSPQSIKFGH SRNHSLNNNN TTTSVSSPGS SRSSSVIVQS PQNPLPSPMP ILPPITSLVN EQKKKKRVPT GQNIGNAIDS DATDIDEDVT DDEI
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