Gene PICST_30511 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_30511 
Symbol 
ID4838329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp250525 
End bp251889 
Gene Length1365 bp 
Protein Length454 aa 
Translation table12 
GC content45% 
IMG OID640389644 
Productpredicted protein 
Protein accessionXP_001383678 
Protein GI150864728 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACAG GTAAACCAAC TACACCGTTG TCTTCACCAA AAGTCACAGA CAAAAACAGC 
ATCAGACCGT CGACGCCTCC TCCATCATCG TCGGGAGACA ACTCGCTTCA TAGGATCTCA
GCAAGCTACT TGAAAACGCC AGAACCGACC CTGGAAGTTC CGTTTTCACC ATCCTTGAAA
CGTACAAATT CAGGCTCTTA CAAACTGCCT GACTATAAGT TAAACCACAA TAACGTGACC
TCACCCTACA GCTCTGCAAA CTTGTTGAAG ACACCCAGAC ATACTGGCTA TGATTCTGCT
GAAAGGCGTC TGAAACTCCA GAAGACTCCA CAGTACTTTT CCCCAGCCAA GAAGTTGTTC
CAGAATGAAG ATGGTAGTCC CAATAAGGAA GATCTCACAG AGATAACGCT GCAGCTCAAA
ACACGATTGA GTTCTGCATT GGGCAAGTTG CAACGGGACG ATTCATCTGC TTCAAGAAAT
CACATCACTT TTACAGAATT GTCGTTTGAC TCAGAAACGT CGCCGACAAA GAAGCTGAAG
CCGGAGTCTG ACAAAAAAGT ATGGTCGCCA TCAAATTCTC TCCAAAGAGC CAATCTAAAT
CTCCAGACGT TACAACAATC GCCTCTTCCC AAGAACACTA CCTCACCTCA TTTGGTACAA
CCTTCATCAT TTGTTTCCTC CAACTCAAAT TCTCCCTTGA AACAGTCCCC TTTTTTGCAT
AATGATTTGG AAAATAGACC CTACCTAAAT ATGCCTTCGC CGGATGAAGA GTCCAGTGCC
CACAATGCCT TGTTAGCGGC TTTGTCGAGG CAGAGGCGTA AGTCCAGATC TTCTTTTTCG
CTGGGAACTA AACGCAGATC TTCTATAGTC ACGGCGAATG ATGAAGGATC AACTTTAATT
CTTCAACAGC AACAGCCCAC AACTCCTAGT CAACAGCAGT CGGTAAAATT GCCTCCTCTA
AACATAGCTC TAGGGAGTGA TATCAGAGGA GAACCCTACG GATCAGGGTT ACCTTCGTTT
GAAGCTAAAG AGACTCGTAA AACTAACGAA CAGGACGCTG TATTGTCACT CATGTCGTTG
TCATCACCAC AATCCATCAA ATTTGGCCAC AGTAGGAACC ACAGCCTTAA TAACAACAAT
ACAACCACAT CTGTTTCTTC GCCTGGATCT TCCAGATCGT CACTGGTGAT AGTTCAGAGT
CCACAGAACC CCCTTCCCCT GCCTATGCCT ATTCTTCCGC CCATCACCAG TTTGGTGAAT
GAACAGAAGA AGAAGAAGAG AGTACCAACA GGACAGAACA TTGGCAATGC CATAGACTCA
GATGCCACTG ATATAGATGA AGATGTGACA GACGATGAAA TATGA
 
Protein sequence
MSTGKPTTPL SSPKVTDKNS IRPSTPPPSS SGDNSLHRIS ASYLKTPEPT SEVPFSPSLK 
RTNSGSYKSP DYKLNHNNVT SPYSSANLLK TPRHTGYDSA ERRSKLQKTP QYFSPAKKLF
QNEDGSPNKE DLTEITSQLK TRLSSALGKL QRDDSSASRN HITFTELSFD SETSPTKKSK
PESDKKVWSP SNSLQRANLN LQTLQQSPLP KNTTSPHLVQ PSSFVSSNSN SPLKQSPFLH
NDLENRPYLN MPSPDEESSA HNALLAALSR QRRKSRSSFS SGTKRRSSIV TANDEGSTLI
LQQQQPTTPS QQQSVKLPPL NIALGSDIRG EPYGSGLPSF EAKETRKTNE QDAVLSLMSL
SSPQSIKFGH SRNHSLNNNN TTTSVSSPGS SRSSSVIVQS PQNPLPSPMP ILPPITSLVN
EQKKKKRVPT GQNIGNAIDS DATDIDEDVT DDEI