Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_30503 |
Symbol | |
ID | 4837859 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | + |
Start bp | 227195 |
End bp | 227860 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 12 |
GC content | 40% |
IMG OID | 640389174 |
Product | predicted protein |
Protein accession | XP_001383327 |
Protein GI | 150864490 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.222252 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGCCTG GTATAGACTC TTTGCGATAT CTCGTCTCTG TACGGATGCA CATGTCACCT CCTCCTACGA ACTCCAAAGA AGTGGGCCAT ATCCTCAATG GATTGCGAAA CTTGGGAAAA GTTGAGTTCT TCAAGGTGGA AAGGGACAAG TCCAATTGCG CTGTTTATGG CCAGGAGCTC TTTGTAGTAT TCAATCCTTC TAGAAAAGAT GCGTTTGGCT CTATTGAAAT AACAAAAGAA ATTGAAAATC TGAACGACAT TAATTCAGTA GAGGATGAGG TTACTCTACT AGCATCGCAG AAGAAGATCG TTGACAACAT ATCATCCATA GTGGCTCTTC CACGTTATTC GTATATCGAA AACGACGAAC GATATTTGAA TGGAGAAATT GAGATACCAT TCAAGCACCG TCTTGTCAAA GACGGCCTAA AATACGATAA TCGGTATACT ATTCCATCAT GCACAGTGTA TAACCCCTTT GCTCATATAC GGCCGGCTGA AAATGAAAAG AATTTCAATT ACAATTTTCT CCGTGCTAAT ATACGGCACA ACTTCCAGAA GTTTCATAAG TTCGATCCTA TCACTATCAA AATTGGTCTC TCGCCTTTAA CCAGATGGAT TCTGCCCAAA CCAAAAAAGA GTATCCCATT TACTGGGTTC ATATAG
|
Protein sequence | MKPGIDSLRY LVSVRMHMSP PPTNSKEVGH ILNGLRNLGK VEFFKVERDK SNCAVYGQEL FVVFNPSRKD AFGSIEITKE IENSNDINSV EDEVTLLASQ KKIVDNISSI VALPRYSYIE NDERYLNGEI EIPFKHRLVK DGLKYDNRYT IPSCTVYNPF AHIRPAENEK NFNYNFLRAN IRHNFQKFHK FDPITIKIGL SPLTRWISPK PKKSIPFTGF I
|
| |