Gene PICST_30503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_30503 
Symbol 
ID4837859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp227195 
End bp227860 
Gene Length666 bp 
Protein Length221 aa 
Translation table12 
GC content40% 
IMG OID640389174 
Productpredicted protein 
Protein accessionXP_001383327 
Protein GI150864490 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.222252 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCCTG GTATAGACTC TTTGCGATAT CTCGTCTCTG TACGGATGCA CATGTCACCT 
CCTCCTACGA ACTCCAAAGA AGTGGGCCAT ATCCTCAATG GATTGCGAAA CTTGGGAAAA
GTTGAGTTCT TCAAGGTGGA AAGGGACAAG TCCAATTGCG CTGTTTATGG CCAGGAGCTC
TTTGTAGTAT TCAATCCTTC TAGAAAAGAT GCGTTTGGCT CTATTGAAAT AACAAAAGAA
ATTGAAAATC TGAACGACAT TAATTCAGTA GAGGATGAGG TTACTCTACT AGCATCGCAG
AAGAAGATCG TTGACAACAT ATCATCCATA GTGGCTCTTC CACGTTATTC GTATATCGAA
AACGACGAAC GATATTTGAA TGGAGAAATT GAGATACCAT TCAAGCACCG TCTTGTCAAA
GACGGCCTAA AATACGATAA TCGGTATACT ATTCCATCAT GCACAGTGTA TAACCCCTTT
GCTCATATAC GGCCGGCTGA AAATGAAAAG AATTTCAATT ACAATTTTCT CCGTGCTAAT
ATACGGCACA ACTTCCAGAA GTTTCATAAG TTCGATCCTA TCACTATCAA AATTGGTCTC
TCGCCTTTAA CCAGATGGAT TCTGCCCAAA CCAAAAAAGA GTATCCCATT TACTGGGTTC
ATATAG
 
Protein sequence
MKPGIDSLRY LVSVRMHMSP PPTNSKEVGH ILNGLRNLGK VEFFKVERDK SNCAVYGQEL 
FVVFNPSRKD AFGSIEITKE IENSNDINSV EDEVTLLASQ KKIVDNISSI VALPRYSYIE
NDERYLNGEI EIPFKHRLVK DGLKYDNRYT IPSCTVYNPF AHIRPAENEK NFNYNFLRAN
IRHNFQKFHK FDPITIKIGL SPLTRWISPK PKKSIPFTGF I