Gene PICST_30480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_30480 
Symbol 
ID4837910 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp161254 
End bp161753 
Gene Length500 bp 
Protein Length134 aa 
Translation table12 
GC content40% 
IMG OID640389225 
Productpredicted protein 
Protein accessionXP_001383662 
Protein GI150864718 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCATCA AAGTTTCGGT GCCCTTAACA GTCAGCGAAA TCCTTACCTT GGACAAGTTC 
ATTAACCACA TTGAAGCTAC TGCTTTTGGC AACCATTACA CAGATGACGA CAATCCTCTT
ATCTGCTGCC CTCCCAGCCT GGCCCAATAC AACAAAAGAC AACCATGGGA GGAAATGCAA
TTCCAGTTGC TGGAGTACAA TTCCTTGATT GACAAAGGTA TCACCATTGT GAAAATGAAG
GGAAGCAGAG ACACAAGGAC TGAGAGGTTT GCTTTCAAAT TTAACGGCAC AGAAGAAGTT
GGTGTTCTTA TCAAGTTTGA TGACGACGAA TACAATCTTA TCTTTCCAGA TCAAACTGAA
TATGAGATTA TGTCTGGTAG ACGTTCTTTG TATGTCATTG ATAAAAGTGA AATCTTTGCC
TCGAAGTTCC AAAACTCAAG TTTCAATGAG CAGAAAATTT CAACTTCCAT GAACATCTCC
ATAGCTTGGA TGATTGCTAG
 
Protein sequence
MSIKVSVPLT VSEILTLDKF INHIEATAFG NHYTDDDNPL ICCPPSSAQY NKRQPWEEMQ 
FQLSEYNSLI DKGITIVKMK GSRDTRTERF AFKFNGTEEV GVLIKFDDDE YNLIFPDQTE
YEIMSGRRSF LDDC