Gene PICST_30470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_30470 
Symbol 
ID4837918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp135600 
End bp136088 
Gene Length489 bp 
Protein Length162 aa 
Translation table12 
GC content42% 
IMG OID640389233 
Productpredicted protein 
Protein accessionXP_001383310 
Protein GI126133571 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAATAC AATTAAACAG CGCCAGACAA CTAACCTTCC GTCGGACTTT TTTCAGCGGA 
TGGTTTAAAG CTTGGAGAAC CCAGAAGCTC ATTTATCCTC CAGCAGCTTC TGAGTTTACC
ACCAAGAACA GGATTATTCC CAACTACATA ACATCCAGTA ATGAATTGTA CGATTTGATT
TTGTTCAAGG AGCCAGTCTT ATTGAATTTC ACCTATGCTG AGCCAAAATC AAATAAGGTG
ACCCAGGCAC TTTTTGATGT ATTGAGTGAT GGAAAGAAGT ATCCCAAGCC AGAAAACGAA
CCTGTGTATT TGGTCAATAT CTTGGCCGAT AGCGAAGGAG GACGTGAATT AATGTTGCAG
TACGTAGTAG GAGGTCATAT TCCCGCTGTA GTGGTGTTGA AGAAGCAACA GCCGGTAGAT
ACATTTGTTC CCAATTTAGA AAACTTCAGC GAACAGGACT TAGTAGAGTG GATAAAGACG
ATCGAGTAG
 
Protein sequence
MSIQLNSARQ LTFRRTFFSG WFKAWRTQKL IYPPAASEFT TKNRIIPNYI TSSNELYDLI 
LFKEPVLLNF TYAEPKSNKV TQALFDVLSD GKKYPKPENE PVYLVNILAD SEGGRELMLQ
YVVGGHIPAV VVLKKQQPVD TFVPNLENFS EQDLVEWIKT IE