Gene PICST_30456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_30456 
Symbol 
ID4838297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp111410 
End bp111832 
Gene Length423 bp 
Protein Length140 aa 
Translation table12 
GC content43% 
IMG OID640389612 
Productpredicted protein 
Protein accessionXP_001383654 
Protein GI150864713 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.170844 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCTC TCAACAAGAT CATTTTCCTT CTGGCGTTCT TAGCGTCAGG GTTCCTTCTC 
ATCCTCTTGT CATGCGCTCT CTACGACAGT TACAAGACAT TATGGGTGAT ACTAATCTTC
CTCCTAGCAC CATTGCCGAA CATCGTAGCG TCGTCAATAG ATGCTTCTCG AGACAATTTC
CTAACTTTCA ATAATAACGA CGGCAATGCC CCTTCACCTG TTCAAGAGTT CTGCAAGCTG
TTGACAGGAT TTTTCATTGT CAGTGGGATC TCATTGCCGT TGACGTTTTA CCATTCGAGA
TTGATTGAAT TGGGTGCCAT GGTGATGAGT ATAACGGGAG GGTTGATCGT GTATGTAGAC
ATTGTTGTAT TTATCTGGTT TTTCAGCGAA GATGAGGACG AAAATGACGA TTTCAACTTC
TAG
 
Protein sequence
MNPLNKIIFL SAFLASGFLL ILLSCALYDS YKTLWVILIF LLAPLPNIVA SSIDASRDNF 
LTFNNNDGNA PSPVQEFCKS LTGFFIVSGI SLPLTFYHSR LIELGAMVMS ITGGLIVYVD
IVVFIWFFSE DEDENDDFNF