Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_27034 |
Symbol | |
ID | 4837846 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | + |
Start bp | 1490820 |
End bp | 1491575 |
Gene Length | 756 bp |
Protein Length | 252 aa |
Translation table | 12 |
GC content | 41% |
IMG OID | 640389161 |
Product | predicted protein |
Protein accession | XP_001383572 |
Protein GI | 126134095 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.64186 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.132821 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | AAGAAAGACA ATACCGTTCA GAAGAATGCT GAAAAATCTG TAGAACAAAT TGAGGCCGAC TTGCAGCTTC CTCAGTCCTC TGATGAAGAA GTTGAAGAAC AAAATGACGA AGATGAAGAA GACCAAGATG TGTCTGAATT ATCAGATGAA AGTGATGATG AAGACGAGGA CTTGCGCGGA TTGTCAAGCG AAGAAGAAGA CGACGACGAG GAGGAGGAAG AAGCCGAAAA GGATATCAAG AGCAAGATCA AAAGAGATGG ACATTTGGTG AACAAGACAG TTATCTCTAG CGAAGCCAGG GCTAGCAAGA AATCCAAGAA GAGAGGTATT ATATATCTTG GTAGACTTCC ACAAGGATTC CAAGAACCAG AAATGAAGAA ATACTTCAGC CAATTTGGAA GCATCATAAA CTTAAAATTA TCAAGAAACA AGAAGACCGG TAAGTCCAAG CATTATGGTT TCATAGAGTT CGAGAACTTC GAAATAGCCA AGATAGCAGC CGAAAGTATG AACAACTACT TGATCTTCGG ACATTTGTTA AGATGTGAGG TCGTTGAGAC TGCTAACGAA GACTTGTTTA AAAACACCGA GAAGAATTTC AAGGTAATCC CATGGAAAAA GATCTCCAAG CATAAAAACG ACAAGCCCAA GAGCAAGGAA CAATGGGGTA AGTTGGTCGA GAAGTACGAA AACCAGAAGT TGAAGAAGCA AACCGAGTTG AAGGAGAAGG GTATCGACTT TGACTTGAAT AGCTTA
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Protein sequence | KKDNTVQKNA EKSVEQIEAD LQLPQSSDEE VEEQNDEDEE DQDVSELSDE SDDEDEDLRG LSSEEEDDDE EEEEAEKDIK SKIKRDGHLV NKTVISSEAR ASKKSKKRGI IYLGRLPQGF QEPEMKKYFS QFGSIINLKL SRNKKTGKSK HYGFIEFENF EIAKIAAESM NNYLIFGHLL RCEVVETANE DLFKNTEKNF KVIPWKKISK HKNDKPKSKE QWGKLVEKYE NQKLKKQTEL KEKGIDFDLN SL
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