Gene PICST_27034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_27034 
Symbol 
ID4837846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp1490820 
End bp1491575 
Gene Length756 bp 
Protein Length252 aa 
Translation table12 
GC content41% 
IMG OID640389161 
Productpredicted protein 
Protein accessionXP_001383572 
Protein GI126134095 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.64186 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.132821 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
AAGAAAGACA ATACCGTTCA GAAGAATGCT GAAAAATCTG TAGAACAAAT TGAGGCCGAC 
TTGCAGCTTC CTCAGTCCTC TGATGAAGAA GTTGAAGAAC AAAATGACGA AGATGAAGAA
GACCAAGATG TGTCTGAATT ATCAGATGAA AGTGATGATG AAGACGAGGA CTTGCGCGGA
TTGTCAAGCG AAGAAGAAGA CGACGACGAG GAGGAGGAAG AAGCCGAAAA GGATATCAAG
AGCAAGATCA AAAGAGATGG ACATTTGGTG AACAAGACAG TTATCTCTAG CGAAGCCAGG
GCTAGCAAGA AATCCAAGAA GAGAGGTATT ATATATCTTG GTAGACTTCC ACAAGGATTC
CAAGAACCAG AAATGAAGAA ATACTTCAGC CAATTTGGAA GCATCATAAA CTTAAAATTA
TCAAGAAACA AGAAGACCGG TAAGTCCAAG CATTATGGTT TCATAGAGTT CGAGAACTTC
GAAATAGCCA AGATAGCAGC CGAAAGTATG AACAACTACT TGATCTTCGG ACATTTGTTA
AGATGTGAGG TCGTTGAGAC TGCTAACGAA GACTTGTTTA AAAACACCGA GAAGAATTTC
AAGGTAATCC CATGGAAAAA GATCTCCAAG CATAAAAACG ACAAGCCCAA GAGCAAGGAA
CAATGGGGTA AGTTGGTCGA GAAGTACGAA AACCAGAAGT TGAAGAAGCA AACCGAGTTG
AAGGAGAAGG GTATCGACTT TGACTTGAAT AGCTTA
 
Protein sequence
KKDNTVQKNA EKSVEQIEAD LQLPQSSDEE VEEQNDEDEE DQDVSELSDE SDDEDEDLRG 
LSSEEEDDDE EEEEAEKDIK SKIKRDGHLV NKTVISSEAR ASKKSKKRGI IYLGRLPQGF
QEPEMKKYFS QFGSIINLKL SRNKKTGKSK HYGFIEFENF EIAKIAAESM NNYLIFGHLL
RCEVVETANE DLFKNTEKNF KVIPWKKISK HKNDKPKSKE QWGKLVEKYE NQKLKKQTEL
KEKGIDFDLN SL