Gene PICST_19764 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_19764 
Symbol 
ID4838094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp949483 
End bp950148 
Gene Length666 bp 
Protein Length222 aa 
Translation table12 
GC content39% 
IMG OID640389409 
Productpredicted protein 
Protein accessionXP_001383811 
Protein GI150864830 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.296451 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.782052 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TCTGAAAATG ACTTTCTTAC AACTATATTC GATAACATGG ACCCATATTT GGATACGTAT 
GCTGTATATT CTCAACTCGT GGAGGCTGGC TTTACACCAT CACAAGCCGA TGAAATCATT
AACTTCTTGG TTGTGCAATT AAACTCCAAG CTATCTAAAT TATCAACAAA ATTTGCTCAA
GAGTACGAAT TGGAGAATGA AAAGTATCTC TTTGAAAGCG CTCAACAGGA ATTACGTGTA
GACATCACAA GATCCAGAGA ACAGCATATC AACGAGTTGA TCACCCTTAT TAGTATTTTG
GAAAGAGATT TCCGTGTGAT ATCAGATGAG TTAAATAACG AGTTTCTTCA GCTGAACAAC
GATGTCCAGG TCGCTATCAA CGACCAAAAG TCGGAAAACA CATTGCAAAG TAAGAGAATA
ATCTTGAAAA TCCAAGAGAC CAACCATAAA ATCACCACCG AATTAAATTC AGCGATGAGG
TCAGAAATCG AAAGTTTGAG ATGGCATCTT TCAAGATGGG GAGTGATTGC TATCCTTGTC
TCAGTTTTTT CAGGATGCGC TGCTTTCTAT GCTCAAAGAG CAAAAGCAAA TAGAGAAGAA
CAGTCCAAGA GCGACTTCGT TCCTTTGGTT ATCTACGAAC CAAGTGAATA TGACGATGAC
GACTAC
 
Protein sequence
SENDFLTTIF DNMDPYLDTY AVYSQLVEAG FTPSQADEII NFLVVQLNSK LSKLSTKFAQ 
EYELENEKYL FESAQQELRV DITRSREQHI NELITLISIL ERDFRVISDE LNNEFLQSNN
DVQVAINDQK SENTLQSKRI ILKIQETNHK ITTELNSAMR SEIESLRWHL SRWGVIAILV
SVFSGCAAFY AQRAKANREE QSKSDFVPLV IYEPSEYDDD DY