Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_16361 |
Symbol | |
ID | 4837805 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009043 |
Strand | - |
Start bp | 468409 |
End bp | 469707 |
Gene Length | 1299 bp |
Protein Length | 433 aa |
Translation table | 12 |
GC content | 41% |
IMG OID | 640389120 |
Product | predicted protein |
Protein accession | XP_001383723 |
Protein GI | 150864755 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.898174 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.978716 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATCAGTACTA TAGATATTGT GGGAAACAAG TTCTTCTACA ATGATACAGG AGAACAATTC TTCCTCAAGG GCATTGCCTA TCAAAGATCC AGAAGAGAAG GGGAGGACTT TGATAGAAGT AAAGAAGTTC CCTACATTGA CTCTTTAGCC AATATTACTA CTTGTTTAAG GGATTTGCCT CTTTTAGTTG AACTTGGCGT CAACGTTATC AGAGTTTACC AGATTGATCC AAATGCTGAC CACGACATTT GTATGAATGC TTTGGCAAGT AAGGGAATCT ACGTCTTGGC TGATATGGCA GAATCTGAAA TGTCTATTGT CAGAAACAAC CCAAATTGGG ATACTACTCT CTATACACGT TATACTTCTG TTGTCGATGC TTTGCACAAA TACAACAACT TGTTGGGATT GATTGCTGGT AACGAAGTCA CCAACACAAA GTACAATACC GATGCTTCTC CCTTTGTGAG AGCTGCAATC AGGGATGTCA GGAAGTACAT TAAGAACAGC GGCTACAGAA AGATTCCTCT TGGTTATGCT TCTAACGACG ATCCCGAGAT TAGAAAACTG CTTTCCAATT ACTTTGTCTG TGAAGACCCA GCTACGAGAT GTAGCACTGC TGACTTTTTT GGGCTTAACA CTTATGAATG GTGTGGCTAC TCCACTTACG CCACTTCTGG CTATCGTGAT CTCACCATTG AATATTCCAA GTTTCCAGTT CCAATTTTCT TTAGTGAGTT CGGCTGTAAT GCTGTGTCTC CGCGTCCCTT TACAGAAGTT GAAGCTCTCT ACGGAAGTAC AATGGCAAAG GTATGGTCTG GAGGAATTGT TTATGAATAC TTTCAAGAAG TTAACAACTA CGGTGTGGTC AAGGAAAATG ATGATGGTTC AGTTGCCAAA TTGGAAGACT TTGAGTTTCT TAAGCAGAGA TATAATAGTG TGATTCCTCA AGGCATAACC GCTGCTGAAG AATCGGCAAG AGAAATTCCA AAACTCAATT GTCTGGGACA AAATGACATT TGGAAAGCAA ACACCAGTCT TCCTCTAATA CCCAGTAGTG GCAAGTGTGA TTGTATCTAT GAACTGTTCA AGTGTACCGC TAATCCTGCC AATCTTGACA ACGACTTGTT GAAGGAGATA TGTTCCAATA TTGACTGCTC TGAAATTAGT GCCAATGGAA CTACAGGCGT CTATGGTCCT TATTCTGATT GCCTGCTCCA ACAGAAACTT TCCTATGTTT TGAACAAACA ATACATTGAA GGAGGAAACA AGACAGAATT GTGCGATTAT GATGGAAAA
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Protein sequence | ISTIDIVGNK FFYNDTGEQF FLKGIAYQRS RREGEDFDRS KEVPYIDSLA NITTCLRDLP LLVELGVNVI RVYQIDPNAD HDICMNALAS KGIYVLADMA ESEMSIVRNN PNWDTTLYTR YTSVVDALHK YNNLLGLIAG NEVTNTKYNT DASPFVRAAI RDVRKYIKNS GYRKIPLGYA SNDDPEIRKS LSNYFVCEDP ATRCSTADFF GLNTYEWCGY STYATSGYRD LTIEYSKFPV PIFFSEFGCN AVSPRPFTEV EALYGSTMAK VWSGGIVYEY FQEVNNYGVV KENDDGSVAK LEDFEFLKQR YNSVIPQGIT AAEESAREIP KLNCSGQNDI WKANTSLPLI PSSGKCDCIY ESFKCTANPA NLDNDLLKEI CSNIDCSEIS ANGTTGVYGP YSDCSLQQKL SYVLNKQYIE GGNKTELCDY DGK
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