Gene PICST_13204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_13204 
Symbol 
ID4838268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009043 
Strand
Start bp1689653 
End bp1690213 
Gene Length561 bp 
Protein Length187 aa 
Translation table12 
GC content49% 
IMG OID640389583 
Productpredicted protein 
Protein accessionXP_001383610 
Protein GI150864676 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.318772 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.517646 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATTCCGGACC AAGTCGAGGG GGCTCTGGTA GCCCGGACTT TGGTAAAGCG GGAGTCTCTT 
ACCAATCTCA ACACCATAAA GAAAATCAAA CGTAAGGACG GTTCTGTTCG TAGCTTGCCC
GTTTCTGGGA TGGAGTACTA TGCAGACTGT GACGAAAGTG GGGATCCTTA CCTCCTCCTA
GTAGACATAG GGTCGTCGTT CCAGAATATC CTCAAGGGCT CGGACTATTC CTTAACTATC
AGAGCCGGTG ATCATCCGCT GATCGAAAAC GTAGATCTCA ATTACCCCGG AAGTATCGCA
GCCTCTCCTG CTGGTTCTCC ACGAGTTCAA TTGTCCGGAA GGCTTGTGCA GCTCACATAT
ACGAGTCCCT TCGATCCAGA GTTGATCAAA TTGGAAAGAT GTTTCCTTCG AAGACACCCT
GATGCCCAGC TTTGGCTTCC TCACAATGTG GTTTCCCCGC ATTCGTCGCA CTGGTTCAGG
TTTGAAGTCG ATGATGTCTA CTTTGTTGGA GGTTTTGGAT CGCTGGCATA TATCGGTGAA
ATCGATGCTG ATTTGTACCA C
 
Protein sequence
IPDQVEGASV ARTLVKRESL TNLNTIKKIK RKDGSVRSLP VSGMEYYADC DESGDPYLLL 
VDIGSSFQNI LKGSDYSLTI RAGDHPSIEN VDLNYPGSIA ASPAGSPRVQ LSGRLVQLTY
TSPFDPELIK LERCFLRRHP DAQLWLPHNV VSPHSSHWFR FEVDDVYFVG GFGSSAYIGE
IDADLYH