| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_88123 |
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| Symbol | NSP1 |
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| ID | 4837117 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | + |
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| Start bp | 445669 |
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| End bp | 448344 |
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| Gene Length | 2676 bp |
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| Protein Length | 727 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640388432 |
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| Product | Nucleoporin NSP1 (Nuclear pore protein NSP1) (Nucleoskeletal-like protein) (p110) |
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| Protein accession | XP_001382320 |
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| Protein GI | 150863747 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.26666 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.354188 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TAAAAGAACA GCAACCTATT GTATTGCAGC CTTTGTCTGT CACACATACA AAGCACAGTT
AGTGGTAGAT CGAAGAAAAC CTACTGATTC TAACGATAGT TCCTATACTT TGATTCAAAA
GTAGTTCACT AGAAATCTTA CATAGTATAA GAATCTGTTC AACAAGCACA ATTACATTTC
AATCGCTTGA TCGTTTTCTT CATCAATTCA TTGAAGAACA TCTATTATCA TTTACGGTTG
TAGCGGATTG CCAAAAAAAA ATATAATTTA GTTATTCATT ATTCATTGAA TTCACATTTA
TACTCCTAAG ATATGTTTGG TTCCAATAAC GACCCACAAA AACCACCTGC TTTCAGTTTC
GGAAACCCAT CCACTTCCAA CACCTCTGGT GAAGCCCTGA AACCACCTGC CTTCAGTTTT
GGAGCTCCTT CCACGTCTAA TACTTCTGGT GATGCTTCCA AACCTCCAGC CTTTAGTTTT
GGCTCAGGTG CCTCCAAGCC TCTGGGATTT GGTTCCCTTA ACAGTAGCGG CACTTCTACA
CCCGCATTTG GAACATCAGG TCCCTCTTTT GGAACTTCTG GCTCTGGTTC TACTAGTGCT
TTTGGAGCTT CTGCTAAGGA CAACACTGCT GCTCCTTCTG GTGGCTTGTT TGGATCTTCT
AACGCAGGCA CTTCCACCCC TTTTGGACAA GCTTCAAACG CTCCTCCAGC TAGTGGAAGT
CTCTTTGGAA CTAGCAACAG TAATACGTCT ACAACTCTAG CACCTTCGGG AGGTTTGTTT
GGTAAAAAAG ACGACAAACC TGCGACACCT GCTGCTGATT CTGGCGCTTT GTTCAGTTCG
GCATCGACAA CTACAGGAAA TACTGGTTTT AGTTTTGGGC AGAAACCAGA AGAAAAGAAG
ACCACGGGCT CTGTAACTCC GTTCTCCACT TCTTCTACAC CTCAATTGGG TGATGGATCC
TCTACTTTTG GTGCCAGTTC CAAACCTGCT GAAGGAGGCG AGAAGCCAGC ATTCAGCTTT
GGTGCACCTA AGACGGCTGC TTCAGACAAA CCAGCAGTGT CGTTTAGTAC AACCTTAAAC
AGCAGCGACT CTAATATTCC TAAACTTGCT TTAGGAACGT CAACTATAGA TGAGACTAAA
AAAGATTCGG AAGCTTCGAA GCCTGCCTTT TCTTTTGGTG GTGCAGCCAA ATCTACGACA
GCTCCTGGTG GTTTATTCGG TGGAAGTGCT CCTTCTTCAT CTTCTTCCGG TGGGGGATTT
TCATTTGGTG GTAATAAGGA CGAAGAGAAG AAAGACGACA AGCCTGCCTC TGGTGGATTA
TTTGCTAGTA GTACGTCTTC TGCAGCTCCC GCTGCCGCAG GTGGTTTTTC TTTTGGAACC
AAATCTGAAG AAAAGAAAGA TGATAAACCA GCTGCTGGTG GATTGTTTGG GGGAAGTAGT
TCTACACAAG GCGGGTTTTC ATTTGGCGCC AAGAAGGATG AAACCAAAAA AGATGACAAA
CCAGCCACTC TGGGATTTTC GTTTGGAGCA AAGGATAATG AAGGAAAGAG TGATAAGGCT
ACCTCTTCAG GATTCTCTTT TGGCAAGCAG AAGGACGACA ACAAAACCAG TGAAAAATCA
ACAACTGGAG GTTTCTCTTT TGGAACTAAG AAAGATGAAG AAAAGAAGGA TTCCGCTCCT
GCTGGACCTT CTGGAGGATT CAGTCTTGGT GCCAAAAAGT CAGATGAAAC TACTGATGCT
AAAAAGACTG AAGTTACAGG TAGCACCGCT ACTTCTACCA CAGCCACCAC TACAATTGAT
CCAAGTCTAA AGCCCACCAA AATCCAGCCT ATAGAAGTGT CGATTGACAA CAAGACTCTT
GACGAGCTTA TCATAAAATG GTCTAAACAG TTAGCTGGAA CGTCCAAGAT TTTTAACACA
TACACCGACA AGGTGAGAGA ATGGGACCAA CAATTAGTTG TGAGTGGAGA TGAGATCTTG
AGATTGAACC AGGATTCGAT TGAAGCTGAA GCATTGCAGA GTAAGATCGA TCAACACTTG
TTGTTTGTAG AAAGCCAGCA GAATGAGTTG GAAAAGGTGT TAGATAACTA TGAACAACAA
GCCGATATCT TGTTGAACAA CATAGAATTA AATTCCAGCA GCAATAGTAT CACCAATCAC
TCTGCCGATG CTGGTGGATC TGGATCTGGT GCTGATGATG GTGGCTCTTC AGCTGGCAAC
AATGGGGACA GTAGCACGCT AAGTGTCACT GATAAGTTAA GAGAGAAGGC ATACCATTCT
GCTGAATTGT TGGACGAGAG ACTCGACAAC TTGGGCGACA ACTTATCGAC ATTGATCAGC
GAGATCAATG CTGTCAGTGA AGTTTTTACC AAGAACTCCA TCAACGAGTT TGCTCTTCCA
GCACCTGCAA ATGGTTCTCA AAATGGAAGC GCCTCTGAGA GCAAGTCCGG TAACGGCGAT
GAAAATCCTA TCGAAGAGAT AGTCAAGTTG TTGAACTTGC ATTTGGACAA CTTGAAGTAC
ATCGAAGACA CCGAAGAGAA GTTGAAGACC AAGATCAACA AGATCAATAA TATTAAGAAG
ACACATTAGG AGAGAATATG CAATAGCATA GTAGATACAT AGTGTAATGT AGGTATATTA
TATTAGTAGA TATATACATA GAAGAAGAAT GTTCTC
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| Protein sequence | MFGSNNDPQK PPAFSFGNPS TSNTSGEASK PPAFSFGAPS TSNTSGDASK PPAFSFGSGA
SKPSGFGSLN SSGTSTPAFG TSGPSFGTSG SGSTSAFGAS AKDNTAAPSG GLFGSSNAGT
STPFGQASNA PPASGSLFGT SNSNTSTTLA PSGGLFGKKD DKPATPAADS GALFSSASTT
TGNTGFSFGQ KPEEKKTTGS VTPFSTSSTP QLGDGSSTFG ASSKPAEGGE KPAFSFGAPK
TAASDKPAVS FSTTLNSSDS NIPKLALGTS TIDETKKDSE ASKPAFSFGG AAKSTTAPGG
LFGGKKKDDK PASGGLFASS TSSAAPAAAG GFSFGTKSEE KKDDKPAAGG FSFGAKKDET
KKDDKPATSG FSFGAKDNEG KSDKATSSGF SFGKQKDDNK TSEKSTTGGF SFGTKKDEEK
KDSAPAGPSG GFSLGAKKSD ETTDAKKTEV TGSTATSTTA TTTIDPSLKP TKIQPIEVSI
DNKTLDELII KWSKQLAGTS KIFNTYTDKV REWDQQLVVS GDEILRLNQD SIEAEALQSK
IDQHLLFVES QQNELEKVLD NYEQQADILL NNIELNSSSN SITNHSADAG GSGSGADDGG
SSAGNNGDSS TLSVTDKLRE KAYHSAELLD ERLDNLGDNL STLISEINAV SEVFTKNSIN
EFALPAPANG SQNGSASESK SGNGDENPIE EIVKLLNLHL DNLKYIEDTE EKLKTKINKI
NNIKKTH
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