| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_88066 |
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| Symbol | |
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| ID | 4836825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | - |
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| Start bp | 769321 |
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| End bp | 771035 |
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| Gene Length | 1715 bp |
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| Protein Length | 527 aa |
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| Translation table | 12 |
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| GC content | 45% |
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| IMG OID | 640388140 |
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| Product | predicted protein |
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| Protein accession | XP_001382918 |
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| Protein GI | 150864193 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
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| TIGRFAM ID | [TIGR02344] T-complex protein 1, gamma subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0363344 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TCTTTTATTG CACACGATTC AAAAGAATCA GTCTGTGACT CGTGGTTATA AAAAAGAGCA
CCAGAAAATC TCACAAATGC AGGCTCCAGT CGTATATCTT AATACCTCCA CAGAGAGAAA
GACAGGCAGA AGAGCCCAGA TCGCCAACAT CACCACCGCC AAAGCGGTCG CTGATATCAT
CAGAACATGT CTTGGCCCCA AGGCGATGTT GAAGATGTTA TTGGATCCAA TGGGCGGCAT
TGTTTTGACC AATGATGGCC ACTCCATCTT AAGAGAGATC GATGTGTCTC ATCCAGCAGC
CAAATCCATG ATTGAATTGT CGAGAACGCA AGACGAAGAA GTCGGCGACG GTACTACAAC
CGTGATCATT TTGGCTGGTG AAATTTTGGC ACAAACGTTT CCATATATCG AGAAGAATAT
CCACCCTGTC ATTATCATTC AGGCATTGAA GAGAGCCTTG ACTGATGCCT TGGAGATCAT
TCACAGCGTT TCTGTCCCTG TAGACCCTGA AAACGAGGAA GCTCTCACTA AGTTGATCGG
TGCCGCTATC GGAACCAAGT ATGTTCACAA ATGGTCGAAG AAGATGTGTA ACTTGGCTTT
GACTGCCGTC AAAACCGTTA TGATCAAGAA GGGAGATTAC AAGGAAATCG ACACCAAGAG
GTATGTTCGT TTCGAAAAGA TCCCCGGCGG AGAAGTAGAA GACTCTGAAG TCTTGGACGG
GATCTTGTTG AACAAGGATG TTACCCATCC CAAGATGAAG AGACACATTG AGCTGCCTCG
TGTGATATTG TTGGATTGCC CATTGGAATA TAAGAAGGGA GAATCGCAAA CCAATATTGA
AATTACCAAG GAAGAAGACT GGAACAGAAT ATTACAGATC GAAGAAGAGC AAGTCAAATT
GATGTGCGAA CAGATCTTAG AGCTCAAGCC CGACTTGGTC ATCACCGAAA AGGGTGTCTC
TGACTTGGCC CAACACTACC TCTTGAAGGG TGGAGTAACT GCCTTGAGAA GAGTCAAAAA
GTCAGACAAC AACAGAATCT CCCGTGCTAC CGGAGCCACC ATTGTTAATA GAGTAGAAGA
CTTGAAAGAG TCGGACGTTG GTACCAAGTG TGGATTGTTC AAAGTCGAAT TGATTGGCGA
CGAGTACTTT TCCTACATCG TCAAGTGTAA GGAACCACAA GCATGTACAA TCGTATTGAG
AGGTCCTTCC AAGGATATTT TGAACGAAAT AGAACGTAAC TTGCAGGATG CCATGGCTGT
GACCAGAAAT ATCTTGTTCG AACCTTCATT GTCTCCAGGT GGAGGTGCCA CAGAAATGGC
TGTCTCTGTC AAATTGTCTG AAAAGGCTAA AAGCATCGAA GGTGTAGCCC AATGGCCTTA
TCAGGCAGTA GCCGATGCTT TTGAAGTCAT CCCTAGAACA TTGATCCAGA ACTGTGGTGG
TAAACCCATC AGAGTTTTGG CACAATTGAG AGCCAAGCAC GCTCAGGGTG AACACACCTG
GGGGATTGAC GGGGAAAACG GTACCATTGT CGATATGAAT GAATACGGCA TCTGGGAACC
AGAAGTAATC AAGCAGCAAT CGATCAAGAC CGCTATAGAT AGTGCCTCGA TGTTGTTGAG
AGTGGATGAC ATCGTCAGTG GTGTTCGTCA GCAGCAATAG CCATACCCGT ATAGATAATA
TAGCGCAATA CAACTGTATC TATTTTATTA TAGTG
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| Protein sequence | MQAPVVYLNT STERKTGRRA QIANITTAKA VADIIRTCLG PKAMLKMLLD PMGGIVLTND
GHSILREIDV SHPAAKSMIE LSRTQDEEVG DGTTTVIILA GEILAQTFPY IEKNIHPVII
IQALKRALTD ALEIIHSVSV PVDPENEEAL TKLIGAAIGT KYVHKWSKKM CNLALTAVKT
VMIKKGDYKE IDTKRYVRFE KIPGGEVEDS EVLDGILLNK DVTHPKMKRH IESPRVILLD
CPLEYKKGES QTNIEITKEE DWNRILQIEE EQVKLMCEQI LELKPDLVIT EKGVSDLAQH
YLLKGGVTAL RRVKKSDNNR ISRATGATIV NRVEDLKESD VGTKCGLFKV ELIGDEYFSY
IVKCKEPQAC TIVLRGPSKD ILNEIERNLQ DAMAVTRNIL FEPSLSPGGG ATEMAVSVKL
SEKAKSIEGV AQWPYQAVAD AFEVIPRTLI QNCGGKPIRV LAQLRAKHAQ GEHTWGIDGE
NGTIVDMNEY GIWEPEVIKQ QSIKTAIDSA SMLLRVDDIV SGVRQQQ
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