| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_87754 |
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| Symbol | SER3 |
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| ID | 4837086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | - |
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| Start bp | 1772412 |
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| End bp | 1774024 |
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| Gene Length | 1613 bp |
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| Protein Length | 468 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640388401 |
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| Product | 3-phosphoglycerate dehydrogenase, serine biosynthesis |
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| Protein accession | XP_001383109 |
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| Protein GI | 150864337 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.668968 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATTTGAAACT GAACCAATTC TCATTAAATT CTTGTATTTA AATAGTTAAA GAATTTTGAG
TATCAGAATT TTTCAGTGTA AAGTGATCAA AAGTGTTCAT TCCGAATAGA TTATTCTGAT
TTTCTTATAA CAACTCCAGC TAATTATCAT GTCTTCTCCA CAGCAAATTG CCGACTCGTT
TCAACAGGCA TTGAACCTTT CTAGTTCTCC CAATGGAACC AATGCTGTTT CGACTTCTCC
TACTCAACTG TACTTGTCGC AGTACATGCA GTTGAACCAG AAGCCTACCA AGGCATTGAA
GCCATTCTCC ACCGGAGACA TCAAGATCTT GTTGTTGGAA AACGTCAACC AGACTGCCAT
AAATATTTTC CACAACCAGG GCTACCAGGT TGAGTTCTAT AAGAGCTCGT TGCCTGAAGA
TGAGTTGATT GAGAAGATCA AGGACGTGCA TGCCATCGGT ATCAGATCCA AGACCAAGTT
GACCCAAAAG GTTTTACAGC ATGCCCGCAA TTTGGTCACT ATTGGTTGTT TCTGTATCGG
TACCAACCAG GTCGATCTTG AGTTCGCTGC AAAGTCGGGT ATTGCTGTGT TCAACTCTCC
TTTCTCCAAC TCCAGATCCG TTGCTGAATT GGTTATTGCT GAAATCATCA CTTTGGCTAG
ACAATTGGGT GACCGTTCGA TTGAAATGCA CACTGGTACC TGGAACAAAG TCTCTTCCAA
ATGCTGGGAA ATCAGAGGTA AGACTTTGGG AATCATTGGT TACGGCCATA TCGGTTCCCA
GTTGTCAGTC TTGGCTGAAG CCATGGGTAT GAATGTTATC TACTACGATA TCATGATGAT
TATGTCATTG GGTAACTCCA AGCAGGTTGA CACCTTAGAC GACTTGTTGT CCAGAGCTGA
CTTTGTCTCG TGTCACGTTC CTGCCACTAC AGAAACAAAG AATTTGTTGA GTGGTCCTCA
GTTCGCTGCT ATGAAAGATG GCTCTTATGT AATTAACGCC TCCAGAGGTA CCGTTGTAGA
TATCCCAGCT TTGGTTCAGG CCATGAAGGC TGGAAAGATT GCCGGTGCTG CCTTGGACGT
GTATCCTAAC GAACCAGCCA AGAACGGTGA AGACTTGTTT GTCAACTCGT TGAACGACTG
GGCTTCGGAC TTGTGCTCGT TGAGAAACGT CATTTTGTCG CCTCACATTG GTGGTTCTAC
AGAAGAGGCC CAGTCGGCAA TTGGTGTTGA AGTCGGTTCT GCCTTGACCA AATACATCAA
TGAAGGTAAC TCTACTGGTG CCGTCAACTT CCCAGAAGTC TCGTTGAGGG CCTTGGACTT
GGACCAGCAA AACACTGTCA GAGTTTTGTA CATCCATCAA AACGTGCCTG GTGTTTTGAA
GACTGTCAAC AACATCTTGT CCAACCACAA TATCGAGAAG CAGTTCACTG ATTCCCAGGG
CGAAATCGCC TACTTGATGG CCGATATCTC TGATGTGGAC ATCACCGATA TCAAGTCATT
GTATGAACAA TTGGAACAGA CTCCATACAA GATCGCTACC CGTTTGTTGT ACTAAATTAT
ATAAATGTTC TAAAAATCTA CCTATGCGTA TATACTAATT AATGCTACTA TAG
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| Protein sequence | MSSPQQIADS FQQALNLSSS PNGTNAVSTS PTQSYLSQYM QLNQKPTKAL KPFSTGDIKI
LLLENVNQTA INIFHNQGYQ VEFYKSSLPE DELIEKIKDV HAIGIRSKTK LTQKVLQHAR
NLVTIGCFCI GTNQVDLEFA AKSGIAVFNS PFSNSRSVAE LVIAEIITLA RQLGDRSIEM
HTGTWNKVSS KCWEIRGKTL GIIGYGHIGS QLSVLAEAMG MNVIYYDIMM IMSLGNSKQV
DTLDDLLSRA DFVSCHVPAT TETKNLLSGP QFAAMKDGSY VINASRGTVV DIPALVQAMK
AGKIAGAALD VYPNEPAKNG EDLFVNSLND WASDLCSLRN VILSPHIGGS TEEAQSAIGV
EVGSALTKYI NEGNSTGAVN FPEVSLRALD LDQQNTVRVL YIHQNVPGVL KTVNNILSNH
NIEKQFTDSQ GEIAYLMADI SDVDITDIKS LYEQLEQTPY KIATRLLY
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