| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_87680 |
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| Symbol | SSC1.1 |
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| ID | 4837185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | - |
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| Start bp | 1594770 |
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| End bp | 1596928 |
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| Gene Length | 2159 bp |
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| Protein Length | 650 aa |
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| Translation table | 12 |
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| GC content | 41% |
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| IMG OID | 640388500 |
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| Product | Nuclear-encoded mitochondrial protein member of the heat shock protein 70 (HSP70) family |
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| Protein accession | XP_001383082 |
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| Protein GI | 150864315 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0443] Molecular chaperone |
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| TIGRFAM ID | [TIGR02350] chaperone protein DnaK |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.227121 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GATAAGTTCA TTATTGACTT TATAGAAGAG TTGTCTGTAT TACATATACA CTTTTCTCTA
TAAAAGTTAT TTAAAAGGTT CTTTCACTTT CATAATAGAA TATCAATTTC AGAATGCTCA
GAACAAGTCT CCCAAGGCAG ATCCTGCTAG CAAGTCGGAT TTTTCAGCGG AAATTCCATT
CAGTGATTGG TATAGACTTG GGAACTACCA ATTCTGCTGT GGCAATTGTG GAAGGTGGAG
AAGCAAAGAT CTTGGAAAAC GAAGAGGGGG GAAGAACCAC ACCTTCTATA GTATCTTTCT
CCAAGCGAGG ACAAGATGAG GAAGTTCTAG TAGGATTAGC AGCTAAGAGG CAAGCAGCCA
TTAACCCGGA AAACACTTTT TTTGCCACCA AGAGACTCAT TGGCCGTAAA TACGAAGACG
ACGAAGTCCA ACGTGACTTG AAGAATGTTC CCTATAAGAT TTTCCCTCAT TCTAATGGAG
ACGCCTGGTT AAGCACTACG TATGGGAAAC AGATGTCTCC GCCTCAGATC AGTGCTTTAA
TCTTGAAGAA AATGAAAGAG GTAGCGGAAA GCAATCTCAG CAAAGATAAG TTACCTATCA
AGCATGCTGT AGTGACTGTG CCGGCATATT TCAACGATGC CCAGAGACTG GCTACCAAGA
AGTCTGGCAA ACTCGTAGGC TTAGACGTAT TGCGCGTAGT AAATGAACCT ACGGCTGCTG
CTTTGGCTTA CGGTATAGAC AAGAAACAGA GCGACGGAAT TGTTGCGGTG TTTGACTTAG
GAGGAGGTAC GTTTGATATC TCTATCTTGG ACATAGAAGA CGGCGTATTT GAAGTCAGAG
CCACTAATGG AAACACCCAT TTGGGAGGTG AGGACTTTGA CATCCTTCTC TTGAACTATA
TCTTGGATAC GTTTAAAAAA GAGAACGGCG GACTCGATTT GCTGAATGAT AGGTTCGCTG
TTCAGAGAAT TAGAGAAGCA GCAGAAAAGG CCAAGATCGA GCTTTCTCAT GTCAAAGAAA
CAGAGATCAA CATTCCATTC ATTGTCAAAG ATAAACACAT CAGTATCAAG TTGACCGAGG
ATGAGTTGGA TCAAATGTCT TTGCATTTGA TCAATAAAAC CATCGATCCA GTCAAGAGAT
GTATTAGAGA TGCCGAGTTG AAAATTAAGG ATATCGACGA GGTTATTTTG GTTGGTGGAA
TGACCAGAAT GCCAAAATTG AGAAAGGTTG TAGAAGAGTT GTTCAATAAG AAGCCCAACA
CGGCTGTAAA TCCAGACGAA GCAGTTGCTC TTGGTGCGGC TATCCAAGGT GCTGTTTTGT
CTGGTCAGAT AAAGGATGTG ATCTTATTGG ATGTGACTCC CTTGTCTTTA GGTATAGAAA
CTTACGGTGG TATTTTCAGT CCATTAATTC CCAGAAACTC GGCGGTGCCT GTAAAGAAAG
AACAGATATT TTCGACTGCT GTAGACGGAC AAACTGGTGT GGAAATTAGA GTATACCAGG
GCGAAAGATC TCTTGTCAAA GACAACAAAT TGATAGGAAA CTTCAAATTA TCCAATATTC
CTCTTGGGCC CAAGGGTACT CCACAAATAG CCGTCAACTT TCAAATTGAT GCTGATGGAA
TCATCAATGT AACAGCCACT GATAAGACAC CATATCCCAA AGACCTGGAG TTCTATAATA
AGCCTAACAC TGTTTCCATC CAGGTTTCAG GCGAAACCGG ACTTTCAGAA GAAGAAGTAA
AGCGTATTCT AGAGGAAAGC GAGAAGAACA AACTTCTTGA CGAAAAGCTT CGGAAATACT
ACGAACATGC TTCAAGAGCT GAAATATTAT GCACCGACAC AGACAATGCG CTTGCCCAAT
TTGGAGAATT GATGGAACAG ATAGAAAGAG AGTCGATATC GGCTAAGAAA GATGCCATCA
GAGTCAAGAT CAATGATATC AGAGAGAATA AAATTCTTCA CGACCCTGTT GTTCTCAATG
AAGAGGTCAA TGCCATGCAA AACGAATGTC TCCAGGCAAT TAGAAAAGTA GCTGCCAAGC
AACAGGAACA GCAGAAGAAT GTATAATTTA AATAGGTATA CTTGTACATA GTTAAGTAGA
CCAGTCTACG ATGCACCATC TTTTGTTGGC GCCATACATT CAATAGATAC ATTTTATTG
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| Protein sequence | MLRTSLPRQI SLASRIFQRK FHSVIGIDLG TTNSAVAIVE GGEAKILENE EGGRTTPSIV
SFSKRGQDEE VLVGLAAKRQ AAINPENTFF ATKRLIGRKY EDDEVQRDLK NVPYKIFPHS
NGDAWLSTTY GKQMSPPQIS ALILKKMKEV AESNLSKDKL PIKHAVVTVP AYFNDAQRSA
TKKSGKLVGL DVLRVVNEPT AAALAYGIDK KQSDGIVAVF DLGGGTFDIS ILDIEDGVFE
VRATNGNTHL GGEDFDILLL NYILDTFKKE NGGLDLSNDR FAVQRIREAA EKAKIELSHV
KETEINIPFI VKDKHISIKL TEDELDQMSL HLINKTIDPV KRCIRDAELK IKDIDEVILV
GGMTRMPKLR KVVEELFNKK PNTAVNPDEA VALGAAIQGA VLSGQIKDVI LLDVTPLSLG
IETYGGIFSP LIPRNSAVPV KKEQIFSTAV DGQTGVEIRV YQGERSLVKD NKLIGNFKLS
NIPLGPKGTP QIAVNFQIDA DGIINVTATD KTPYPKDSEF YNKPNTVSIQ VSGETGLSEE
EVKRILEESE KNKLLDEKLR KYYEHASRAE ILCTDTDNAL AQFGELMEQI ERESISAKKD
AIRVKINDIR ENKILHDPVV LNEEVNAMQN ECLQAIRKVA AKQQEQQKNV
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