Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_87669 |
Symbol | NPT1 |
ID | 4837037 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | + |
Start bp | 1588854 |
End bp | 1590287 |
Gene Length | 1434 bp |
Protein Length | 425 aa |
Translation table | 12 |
GC content | 42% |
IMG OID | 640388352 |
Product | nicotinate phosphoribosyltransferase |
Protein accession | XP_001382527 |
Protein GI | 126132004 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1488] Nicotinic acid phosphoribosyltransferase |
TIGRFAM ID | [TIGR01514] nicotinate phosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | CTACCATGAC ATTGAAAGAG CCCGCTGCCA TCACATCCCT CTTGGATACA GACTTATACA AGTTGTACAT GCATGCTGCG GTCAACAAGC ATTTCAAGAA TACGCCAGTA ACATACAAAT ACACCAACCG TACGCCTTCG ATGGTTTTCA ATGAGGCTTC TATCGCCTGG TTGAAGAAGC AAGTCAGCTT GTTGGCGGAG TTGCGATTCA CGGGAGAAGA GATTGGATAC TTGAAAAAGA CATTACCACA ATTGCCGGAG GAGTACTTCG CATACTTGAA GACGTTCAAG TTAGACCCAG CTACGCAGGT TAAGTATTAC AACGATGGAA AGGACGAACT TGCCGATTTC CAGCTTGAAA TCGCAGGTAA CTGGGATGAA ACAATCCTTT ACGAGATTCC AGTTTTGGCA TTGCTTTCAG AAGCCTACTT TAAGTTTGTT GACACCAACT GGACCTACGA TGGCCAGGAC GAATTGGCCA AGCTCAAGTG TTCTCGATTG TTTGCTCACA ACTGTCTTTT CAGCGAGTTT GGAACTAGAC GTAGAAGATC GTTCAGAACT CAGGATATAG TCGTTAAGTC TTTAAAAGAA TACTCTTTAG CACACCCAGA GCAAAAGCAT CTTTTGTTGG GTACTTCTAA TGTGCTATTG GCCAAGAACT ACGACTTGGC TCCTATTGGG ACTGTAGCTC ATGAATGGTT CATGGGTACT GCTTCTGTCA GCCAGGACTA TACCAATGCC AACAAGCTAG CCATGGACTA TTGGATCGAT ACTTTTGGCC CAAAAAATGC TGGACTTGCC CTCACAGACA CGTTTGGAAC GGAATCATAT CTTAAAGTCT TCAACAAGCC ATACTCTGAT TACTACACTG GAGTAAGACA AGACTCTGGA GACCCAGAAG TATACGCAGA GAAGATTGCT GCTCACTACA AGAAATTGGG GTACGCCGAT TTCTCCAAGA TCATCTGTTT TAGCGACTCA TTGAATATCG AGAAGTGCTT TAAATACAAG CAAAAGTCGG ACGAATTGGG CTTAATGGCT ACTTTTGGTA TTGGAACATT CTTCACAAAC GATTTCAAGT CTACAGTGGA ACCATACGCC AAGTCTGCTC CTCTCAATAT TGTCATTAAG TTAAAGAATG CCGGTGGATA TGACTCCATC AAGATCAGTG ACAACTTGGG CAAGAATATG GGAAACCCAG AAATCGTGTC GAGGGTGAAA AAGGAATTGG GCTACGAAGA AAAACGTTGG GATGAAGGAG ACGAGTCCAA GAGATGGACA TGAACAACAG ATTAAAGAGA CGCTTGAACA GGTACAGTAC AAAAAAGACT CAAAATAACT TTTCGATAAT TTTACGAGTG TGTATGATTG TTACATAGAA TGACCTAATG TCCAGTATTA CAATGCTAAC TAGCATAATT ACATAACAAT TGGT
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Protein sequence | MTLKEPAAIT SLLDTDLYKL YMHAAVNKHF KNTPVTYKYT NRTPSMVFNE ASIAWLKKQV SLLAELRFTG EEIGYLKKTL PQLPEEYFAY LKTFKLDPAT QVKYYNDGKD ELADFQLEIA GNWDETILYE IPVLALLSEA YFKFVDTNWT YDGQDELAKL KCSRLFAHNC LFSEFGTRRR RSFRTQDIVV KSLKEYSLAH PEQKHLLLGT SNVLLAKNYD LAPIGTVAHE WFMGTASVSQ DYTNANKLAM DYWIDTFGPK NAGLALTDTF GTESYLKVFN KPYSDYYTGV RQDSGDPEVY AEKIAAHYKK LGYADFSKII CFSDSLNIEK CFKYKQKSDE LGLMATFGIG TFFTNDFKST VEPYAKSAPL NIVIKLKNAG GYDSIKISDN LGKNMGNPEI VSRVKKELGY EEKRWDEGDE SKRWT
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