| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_87591 |
|---|
| Symbol | DPM1 |
|---|
| ID | 4836873 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009042 |
|---|
| Strand | - |
|---|
| Start bp | 2506042 |
|---|
| End bp | 2506787 |
|---|
| Gene Length | 746 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640388188 |
|---|
| Product | dolichol-P-mannose synthesis |
|---|
| Protein accession | XP_001383237 |
|---|
| Protein GI | 126133424 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.00511018 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | CAATGGGATC AGACAAGTAC TCGGTGATAT TGCCAACGTA TAACGAAAGA AAAAACTTGC
CCATCTTGGT GTATTTGTTG GCTGAGACCT TCAAGAAGAA CAACATTGAA TGGGAAGTAG
TCATTGTGGA CGACAACTCC CCCGATGGTA CACAAGTTGT CGCCAAGCAG CTTATTGACA
TCTTTGGTGC GGACCACATT CAATTGAGAG CTAGAGCTGG AAAGTTGGGT TTGGGTACAG
CTTATGTCCA TGGCTTACAG TTTGTCACTG GTAACTATGT CATAATCATG GATGCCGACT
TCTCGCACCA TCCAGAAGCA ATTCCTGAAT TCATTGCCAA GCAGAAGAGT GAAAACTTTG
ACATTGTGAC CGGAACAAGA TATGCCGGTG ATGGAGGTGT TTTTGGTTGG GACTTAAAGA
GAAAGTTGGT TTCCAGAGGT GCCAACTTCC TTGCTGCCAC AACATTGAGA CCAAACGTAT
CTGACTTGAC TGGCTCTTTC AGATTATACA AGAAGGATGC TTTGGCTAAA ATAATCGAAG
TTACCCAGTC CAAGGGATAC GTTTTCCAGA TGGAAATGAT GGTGAGAGCC AGATCATTGG
GATTCAAGAT TGGTGAAGTA CCAATTTCTT TTGTCGACAG ATTATACGGT GAGTCTAAAT
TGGGAGGCGA TGAAATCGTT GGTTATTTGA AGGGTGTTTG GACTTTGTTT ACCAGTGTAT
AGTTGGTAAT GTACATTTAG GAATAG
|
|---|
| Protein sequence | MGSDKYSVIL PTYNERKNLP ILVYLLAETF KKNNIEWEVV IVDDNSPDGT QVVAKQLIDI
FGADHIQLRA RAGKLGLGTA YVHGLQFVTG NYVIIMDADF SHHPEAIPEF IAKQKSENFD
IVTGTRYAGD GGVFGWDLKR KLVSRGANFL AATTLRPNVS DLTGSFRLYK KDALAKIIEV
TQSKGYVFQM EMMVRARSLG FKIGEVPISF VDRLYGESKL GGDEIVGYLK GVWTLFTSV
|
|---|
| |