Gene PICST_87580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_87580 
SymbolUTR1 
ID4836704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp2037664 
End bp2039638 
Gene Length1975 bp 
Protein Length575 aa 
Translation table12 
GC content49% 
IMG OID640388019 
ProductNAD kinase associated with ferric reductase 
Protein accessionXP_001383157 
Protein GI150864374 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0061] Predicted sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CAATTCTCTG CTGGTCTTTA GCATTCCTTT ACGACACAAG TACGGAGTCC CCACTGAAAT 
CTCGTAGTGG ATCTATTCTA CTTTCTTAGT CATCAGTTTC ACCGGAAACT TTTTTTCCAG
TGCCAGAGAT TCATATTTTC CATTAATTCG TCATCTTCGA CTAAAGTCCC ACTAGTCCAT
GTTTACAGAC AAGAAGAGCC AGCTCACAGC ACGACTCCAC GGCGAGATGA CGAACACAGA
TAGGCCCACA AATCCTACCA AGCGAGCTCT GAGTCGCGGC TACGGAACAG TTGTGACTAA
TGGCCACAGC ATCATCGCTA ACACCAGCCA TGCCAACGGG TTTCGGAGCC AGAGCCAGAG
CCAGATCCAG TCGCAAAACA GCAGCGGAAC TACTAGTCCG GTGGGCAACC ACATTCTGCG
AGAGGCTCCG ATGATCCACA ACAAGCTCTA CTGCGAGCAG GTCAACAAAA AGATTACTAG
TTCTACCAAC ATGTTGCAGA AGCTTTCTGT AGACGAAATC CGTTCGGTCA AGTCCCATAC
AGAATTAGCG GAGACAGCCA ACGGAGTGCG TATGCTCGCA AAAAACTTGT CCAAGACCAC
GATCCAGTTG GATGTGCGTG CCATCATGAT TGTGACCAAA GCCAGAGACA ACTCTCTCAT
CTATTTGACA CGAGAAGTGG TAGAATGGCT TCTCACGCAA GAACGTGACA TCACGGTCTA
TGTTGATGCC AAGTTGGAAA ACCTGAAACG ATTCAACACG GACGACATCC GCACCCAGAT
TCCAAAAGCA AACGGCCTCT TGCGTTTCTG GGACAAGAAG TTCGCCTTGA AAAACCCTGA
GAAATTCGAC TTGGTGGTCA CTTTGGGAGG TGACGGAACA GTACTATATG CGCTGAACTT
ATTCCAACGT GTCGTCCCAC CAGTAATCTC GTTTGCCTTG GGATCTTTGG GCTTTTTGAC
CAACTTCAAG TTCGAGCACT TCCGCGAACG CATGAACACA GTTATAGCCT CGGGCGTAAA
GGCGTACTTA CGAATGAGAT TCACCTGTAG AGTACATACT GCTGACGGTA AGTTGATCTG
CGAACAGCAG GTTCTCAACG AGTTGGTTAT AGACAGAGGT CCATCACCCT ACGTTACCCA
GTTGGAGTTG TACGGAGATG GCTCTTTGCT CACCATTGCC CAGGCTGACG GCTTGATCAT
TGCAACACCT ACGGGTTCGA CAGCATACTC GCTCTCGGCA GGAGGATCAT TGGTCCACCC
AGGTGTCAGT GCAATTAGTG TGACGCCGAT CTGTCCTCAC ACCTTGTCGT TCAGACCCAT
CTTGTTGCCA GACGGTATGT TCTTGAAGGT CAAGGTGCCC GACACTAGTA GATCTACTGC
TTGGGCATCT TTTGACGGTA AGGTCCGAAC CGAATTGCGC AAGGGCGATT ACGTCACCAT
ACAGGCTAGT CCATTCCCGT TCCCTACTGT TATCTCATCG AAAACTGAGT ACATCGACAG
TGTCAGTAGG AACTTAAACT GGAATGCCAG AGAGCAACAG AAGCCCTTCA GCCACTTGTT
GAGCGATCAG AGCCAGCGTA TGATGAGGAA GTCCACATCT GCGGCAACTC AAGATTTGGA
GAATCTCCAT ATCGACAATG GTGCTGCAGA AGACGACTTT GATATCAATT ACAGTTCGGA
TTCAGACTCG ACTCCTTCAG ATAATGAGAC AGAAGAGGAC CTTCCTTACA TTCCTCTTCC
AGGAGACGGC ATCAACACCC CACCACCAGG AAATACTTAC GGTGGATTCG AGGGAACATG
CTTTGCCCAT CCTCATGCCA AAATCACCTT GGACAGCTCG GCTACGTCGA CTACAAACTC
TACCAGATAC TCTTCGTCTA CAACTGGTTC CGGGTCTGAG GATTAGGGTT ATTTTTACAG
GTTTATTAGG TCGCCCAAGG GGGCAGTTAC ATAGTGTGTA ATCAATAGTC ACAGC
 
Protein sequence
MFTDKKSQLT ARLHGEMTNT DRPTNPTKRA SSRGYGTVVT NGHSIIANTS HANGFRSQSQ 
SQIQSQNSSG TTSPVGNHIS REAPMIHNKL YCEQVNKKIT SSTNMLQKLS VDEIRSVKSH
TELAETANGV RMLAKNLSKT TIQLDVRAIM IVTKARDNSL IYLTREVVEW LLTQERDITV
YVDAKLENSK RFNTDDIRTQ IPKANGLLRF WDKKFALKNP EKFDLVVTLG GDGTVLYASN
LFQRVVPPVI SFALGSLGFL TNFKFEHFRE RMNTVIASGV KAYLRMRFTC RVHTADGKLI
CEQQVLNELV IDRGPSPYVT QLELYGDGSL LTIAQADGLI IATPTGSTAY SLSAGGSLVH
PGVSAISVTP ICPHTLSFRP ILLPDGMFLK VKVPDTSRST AWASFDGKVR TELRKGDYVT
IQASPFPFPT VISSKTEYID SVSRNLNWNA REQQKPFSHL LSDQSQRMMR KSTSAATQDL
ENLHIDNGAA EDDFDINYSS DSDSTPSDNE TEEDLPYIPL PGDGINTPPP GNTYGGFEGT
CFAHPHAKIT LDSSATSTTN STRYSSSTTG SGSED