Gene PICST_87511 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_87511 
Symbol 
ID4837551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp1542820 
End bp1543532 
Gene Length713 bp 
Protein Length162 aa 
Translation table12 
GC content47% 
IMG OID640388866 
Productpredicted protein 
Protein accessionXP_001382518 
Protein GI126131986 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CAATCACAAA CATGTCCAAG GTTTACTTCG ATATCGCCGC AAACGGCCAA AAGTTAGGTA 
GAATCACCTT CAAGTTGTAC AACGACGTTG TCCCAAAGAC CGCCGAAAAC TTCCGTGCCT
TGGCTACCGG TGAAAAGGGC TTTGGTTTCG CTGGCTCTGC TTTCCACAGA GTTATTCCTC
AATTCATGTT GCAGGGTGGT GACTTCACCA GAGGTAACGG TACCGGTGGT AAGTCCATCT
ACGGTGAGAA GTTTGCTGAC GAAAACTTTG CCAAGAAGCA CGAAAGACCT GGTTTGCTTT
CCATGGCCAA CGCTGGTCCA AACACCAACG GTTCCCAATT CTTCATCACC ACTGTTCCAT
GCCCATGGTT GGACGGTAAG CACGTCGTCT TCGGTGAAGT TGTTGAAGGC TTCGACGTCG
TCAAGCAGGT TGAAGGTTAC GGTTCCAACT CTGGTGCCAC TTCTGCCAGA ATCACCATTG
AAGCTTCTGG TGAATTGTAA ATGAGGAATT GAAAAATTTG TCCTAGGCAG GAATATCGGA
AACTGTCTGA TTGTGTACGT CAATTGGCGA CTGTGAGAAC TCAATGCTGT CAATTGGCTG
TGTCCAATGG CATGTCGCGT GCATGTCGTG TTTCTGCCGT TCAATTTGGT TTATTAGTTA
ATTATAAAAT GTACGCTGCA CAGACTCGAT TGAATGGGGT CTGATCGGTA TTG
 
Protein sequence
MSKVYFDIAA NGQKLGRITF KLYNDVVPKT AENFRALATG EKGFGFAGSA FHRVIPQFML 
QGGDFTRGNG TGGKSIYGEK FADENFAKKH ERPGLLSMAN AGPNTNGSQF FITTVPCPWL
DGKHVVFGEV VEGFDVVKQV EGYGSNSGAT SARITIEASG EL