Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_87511 |
Symbol | |
ID | 4837551 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | + |
Start bp | 1542820 |
End bp | 1543532 |
Gene Length | 713 bp |
Protein Length | 162 aa |
Translation table | 12 |
GC content | 47% |
IMG OID | 640388866 |
Product | predicted protein |
Protein accession | XP_001382518 |
Protein GI | 126131986 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | CAATCACAAA CATGTCCAAG GTTTACTTCG ATATCGCCGC AAACGGCCAA AAGTTAGGTA GAATCACCTT CAAGTTGTAC AACGACGTTG TCCCAAAGAC CGCCGAAAAC TTCCGTGCCT TGGCTACCGG TGAAAAGGGC TTTGGTTTCG CTGGCTCTGC TTTCCACAGA GTTATTCCTC AATTCATGTT GCAGGGTGGT GACTTCACCA GAGGTAACGG TACCGGTGGT AAGTCCATCT ACGGTGAGAA GTTTGCTGAC GAAAACTTTG CCAAGAAGCA CGAAAGACCT GGTTTGCTTT CCATGGCCAA CGCTGGTCCA AACACCAACG GTTCCCAATT CTTCATCACC ACTGTTCCAT GCCCATGGTT GGACGGTAAG CACGTCGTCT TCGGTGAAGT TGTTGAAGGC TTCGACGTCG TCAAGCAGGT TGAAGGTTAC GGTTCCAACT CTGGTGCCAC TTCTGCCAGA ATCACCATTG AAGCTTCTGG TGAATTGTAA ATGAGGAATT GAAAAATTTG TCCTAGGCAG GAATATCGGA AACTGTCTGA TTGTGTACGT CAATTGGCGA CTGTGAGAAC TCAATGCTGT CAATTGGCTG TGTCCAATGG CATGTCGCGT GCATGTCGTG TTTCTGCCGT TCAATTTGGT TTATTAGTTA ATTATAAAAT GTACGCTGCA CAGACTCGAT TGAATGGGGT CTGATCGGTA TTG
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Protein sequence | MSKVYFDIAA NGQKLGRITF KLYNDVVPKT AENFRALATG EKGFGFAGSA FHRVIPQFML QGGDFTRGNG TGGKSIYGEK FADENFAKKH ERPGLLSMAN AGPNTNGSQF FITTVPCPWL DGKHVVFGEV VEGFDVVKQV EGYGSNSGAT SARITIEASG EL
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