| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_87495 |
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| Symbol | GTA2 |
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| ID | 4837538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | - |
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| Start bp | 875055 |
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| End bp | 876740 |
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| Gene Length | 1686 bp |
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| Protein Length | 509 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640388853 |
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| Product | amidase (GATA)-like protein |
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| Protein accession | XP_001382940 |
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| Protein GI | 150864208 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | [TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATTGTGAAGA ACAACCTTCT CAGCTTGGTT GACTTTATAA TGCTTCGTGT TCGGATTGTT
GGTCGACCTC AGAAGCTTGT TCCGAGCTTT TGTCGGCTTG TACATCGTGC CTCAGCATCT
ACTTCTGATC CTTGGAACAG TTTGATTTCA TCTAGGATCA ATACCAACAA AGACACAACT
TCTGCAGAGA AGAACACTGT CACCGGGTCT TCCACTAGTT GCAATTCTTC TACAGCTTCT
ACGGATGCTG CTTCAAGTCC GGCTGGAAGT CTTTCCGGAA CTACGTACAT AGCGAAAGAC
AATATTGTCA CAACTCATGA GTTCTCCACC GGAGCTTCTA GAATACTTCT GAACTACAGA
AGTCCGTTTG ATGCTACAGT GGTTTTGCTT TTGGATGCTG CTGGACTGAC TTTGCTAGGT
AAAAGCAACT TAGACGAGTT TGGAATGGGG TCTTCTACCA CGAATTCCCA TTATGGTACG
ACATTGAATC CGTTGTATAG TGTTGAAGTT GAAACTGGAA AAGCACACAT TTCTGGAGGT
TCTTCAGGAG GATCGGCGGC TGCTGTTGCC GGAAAACTTG CTAATTTTGC CTTGGGAACT
GATACAGGGG GATCAGTGAG ACAGCCAGCC AGCTACTGTG GGACTGTCGG CTTCAAACCA
ACATACGGCA GGATCTCAAG ATGGGGAGTC ATATCTTATG CTCAGACTCT TGACACCGTA
GGAATCATTT CTGATGACAT CCATACTGTA GAGAAAGTGT ACCATGTCTT GGATAAGTAC
GATGACAAGG ATCCCACATC ATTGCCAGAT GATATAAGGA ACTCTTTGAA ATCAAAATGT
TCAGAAGATG TCAACAGCAC CTCATTGACA GTAGGAGTTC CCCGTGAGTT TGTAGTAGGG
GATCTCTCTC AGGAAGTAAA GGAAGTCTGG TTTTCAGTTC TTTCACAATT GCAGGACATG
GGCCATACAG TCAAGATAGT GTCCGTTCCG TCTATAAAGC AGCTGTTGCT GTCATACTAC
ACGCTTGCTA CAGCCGAAGC TGCCTCCAAC CTCTCTCGCT ACGATGGGGT CAGATACGGA
CAAACTACAG AAGACCTTCA AGAGAAAGCA CATGATCTCA TTGTAGCCAA CAGAACCAAC
GGATTTGGAC CAGAGGTCCA GCGCAGAATT CTCTTGGGAA ATTATACGCT TTCGTCAGAA
TCGGGAGATC ACTATATTAA GGCAACTCAG GTCAGAGAGA AGCTTGTCAA TGAATTCAAC
CAGGTGTTCA ATCTTAGGCA TGTATTTCTG AACGATACTA ATGTAGATAA AGAAACACTG
GGTAGATGTG ATATCTTGGT GGCTCCTACG GCTATAAACA GCGCTCCCAC ACTTGAAGAG
TACCATCAGC AAAATGAAAC CAACTTCTTG AATGACTACG TGAACGATAT CTTGACTGTT
CCAGCTTCTT TGGCTGGTTT GCCTACCATA TCCATACCTC GGGGTAAACA TGGAATCCAA
ATCATGGGCC AATTTGGAGC TGATCAAACA GTGCTAGATG TATCCAAAAA GTTAATGGAA
GTAAAATAAA TTGAAGTAGG TTCCTACTAT CTTCTTGTAT ATATGTATTT TAAGTAAATA
AAAGCGACTG AACATTCTAA AGGGTTCCGC CGAAGGGTTT TATATATTAT ATAAATTATG
AGGTGT
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| Protein sequence | MLRVRIVGRP QKLVPSFCRL VHRASASTSD PWNSLISSRI NTNKDTTSAE KNTVTGSSTS
CNSSTASTDA ASSPAGSLSG TTYIAKDNIV TTHEFSTGAS RILSNYRSPF DATVVLLLDA
AGSTLLGKSN LDEFGMGSST TNSHYGTTLN PLYSVEVETG KAHISGGSSG GSAAAVAGKL
ANFALGTDTG GSVRQPASYC GTVGFKPTYG RISRWGVISY AQTLDTVGII SDDIHTVEKV
YHVLDKYDDK DPTSLPDDIR NSLKSKCSED VNSTSLTVGV PREFVVGDLS QEVKEVWFSV
LSQLQDMGHT VKIVSVPSIK QSLSSYYTLA TAEAASNLSR YDGVRYGQTT EDLQEKAHDL
IVANRTNGFG PEVQRRILLG NYTLSSESGD HYIKATQVRE KLVNEFNQVF NLRHVFSNDT
NVDKETSGRC DILVAPTAIN SAPTLEEYHQ QNETNFLNDY VNDILTVPAS LAGLPTISIP
RGKHGIQIMG QFGADQTVLD VSKKLMEVK
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