Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_87428 |
Symbol | GLT1 |
ID | 4837152 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | + |
Start bp | 2577990 |
End bp | 2585414 |
Gene Length | 7425 bp |
Protein Length | 2126 aa |
Translation table | 12 |
GC content | 45% |
IMG OID | 640388467 |
Product | glutamate synthase |
Protein accession | XP_001382727 |
Protein GI | 150864046 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0069] Glutamate synthase domain 2 [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ACCGAAACTA TCTTTGTTTT AAGTGTAATC GTGCTCCCGT CTGTGTAAAG CTAGCACTTC CATCCCAGAC CTCTTTTTTC GCTAGTCTGA ATTGTCCCCA TAGAGTATAC CGTCCATATA TCTCTATTCA CTATTCAAGA TTGCCTGGAG CCGTTGATTA ATATTATCGT TAGACATTAG AGCGTCCATT GACCACTACT ACCACATACT ACATTCCCTT TAAAACATAT CCAAAAGCAA AAGATTTAGA GTAAGTACTG ATTTTTGAGT GAAGAGATGA AAGAAGTGAA AATGGGCCCA CCAGCCAACG AGGATTGATA CCACTGGCCA TTGACTACAG AGAAGCATGT CCTCACTAGC AGGGTAACAC CAGGCGCAGT CTGGGATGCC AGCTCTATCC AGTGTCTCCA CCGTTCCTCT ACTTCCTCTG TACGGTGTCT ACTTTTTAGT GAAAAAAGTA CTTGAATATT CACATTTTTA ATTTCGCATT TGCACAGATT GCCACTTCCT TGATAAGCAG CATATTCCAT GTCGTCGAAA TCTTGTCTTC CAACGTCCTC TACGTCCAAT TCAAAGTGTT CAGCTGTCAT GTTCCCCACC GAAGATCAAT GAATCATCTG TCTGCCGGTA TCTAAGTCTG CGGCGGTGCG GCAGAGATGA CTATTGTATT CCTGGCTATT ACCATTGAGA TTATTTTCAT TGGGCAGATA ACAGGAGAAA ATTTTCCTTT CGCACTGCAA CCTTGGAGCT ACAGCAACCG AATGATAATT AGGAGTGCGA TAAGAAATCC AATACTGCTC GGTGCTGATA GTGGCCGCTT ACTATAGTCA TCTAGACAGT CGATGGACGT TCTCGATTGC GACTGCCATT GAACTGGCTG AACTTCAAAC TGCATTTTTT CGGACCGGAC TTTTTTTGCA TTTCCCAATT AGGCTGAATT TTTCACTCCG ATATGGGCTC GTACATTCTC TCAGCCTAGA AACATATTCT TTCATTAAAT CTTTTTACCA TTTGACATAC ATATACTAAC ATCAAAATAG TTCAATGAGT TCCTACTTGC CTCAAGAGGA ATTCCAAACC AATATCTACC AATACGATGA AACTCCTGAG AATACATCAT GGGCTTCTGC ATTACCAGTA GCCAAGGGAT TGTACAACCC AGAATACGAA AAAGATGCCT GTGGTGTCGG TTTCACTTGT CATTTGAAGG GTGAAGCCTC CCATAAAATC ATCTCCGACT GCAGAAACTT GTTGTGCAAC ATGACCCACA GAGGTGGTGA GTTGAACCCA AAAGATGGTG ATGGTGCTGG TTTATTGTCT TCCATTCCTC ACAAGTTCTT GAAGCGTGAA TTCAAATACC ACTGCAACAT TGACTTGCCT CCTTTGGGCC AATATGGTAC CGGTAACATC TTCTTCAAGA AGGATGATGC CGTCTTTGAG AAGTCCAAGT CCACTTTCGA GAGCATTGCG GACTCCCTTG GCTTGAAGGT CTTGGGCTGG AGAAAAGTCC CCCACGACTC GTCCATCTTG GGTCCTGCTT CTTTGTCCAG AGAACCATAC ATCTTGCAGC CAACCGTTGT TTTGTCTGAA TTGGCTGGTC AAAACGACAT TGCAGATGAT GTGTTTGTTT CCAAGTACCA AAAGGATTTT GAAAAGAAGT TGTACATCTT AAGAAAGCAG TCGTCTCACT CCATTGGCTT GCACAACTGG TTCTACATTT GTTCCCTTTC CAACAAGACC ATTGTATACA AAGGTCAATT GGCTCCCAAC CAAGTCTACG CTTACTACCA CGATTTGGTC AACGCCGACT ATGAATGTCA CTTTGCCCTT GTCCACTCCC GTTTCTCCAC CAATACTTTC CCATCGTGGG ACAGAGCTCA ACCTTTGAGA TTGGCTGCTC ATAATGGTGA AATCAATACC TTGAGAGGTA ACAAGAACTG GATGAGAGCA AAGGAAGGTG TCATGAGCTC GAAGTTGTTT GGTGAGGAAA TTGACAAGTT GTTCCCTATC ATCGAAGAAG GAGGTTCTGA CTCCGCTGCT TTTGACAACG TCTTGGAATT GCTTACCGTC AACGGAGTGT TGTCGTTGCC AGAAGCCGTT ATGTTGATGA TTCCAGAAGC TTGGCAAAAC GATACTCACA TCGATCCCAA GAAGAAGGCT TTCTACGAAT GGGCCGCTTG TTTAATGGAA CCATGGGACG GACCAGCTTT GTTCACATTT GCTGACGACA GATACTGTGG TGCCAACTTG GATCGTAATG GTTTGAGACC ATGTCGTTAC TACGTCACCG ACGATGACCG TATCATTTGT GCATCTGAAG TTGGTGTAAT TGAAATTGAA CCCGAAAAGA TTTTGCAGAA GGGCAGATTG CAACCGGGTA GAATGTTGTT GGTTGACACC AAAGAAGGAA GAATCGTGGA CGACCGTGAG TTGAAGAATA ACGTCGCTTC CAGATTTGAC TTCAAGTCAT GGGTTCTTGG TAACATGATC TCGTTGGGCG ACTTGATTGA AAAGTTACAG GCCAGAGAAA TCGACTTGTC GGACAAAGTC AGCGACACTT CCTACAGCGT CCAATCAGAC CCTCGTCTTG TTGCCTTTGG TTACTCTCAC GAACAGGCTT CGTTAGTGTT GGCGCCAATG GCTGAAGGAA ATGAAGCTCT TGGTTCCATG GGTAACGACA ATGCCTTAGC TTGTATCTCT GAGCAACCAA AATTGTTATA CGAATACTTC CGTCAATTGT TCGCCCAAGT CACCAACCCA CCTATTGATC CCATTAGAGA AGAAATTGTC ATGTCCTTGG AATGTTACGT TGGTCCTCAA GGTAACTTGT TAGAAATGAA GCCAGACCAA TGTAATCGTT TGTTGTTGAA GTCGCCTGTT TTGTCGAACT CAGAACTTAA CGCTATCAGA AATATTGAAA CGGTTTACCC TAAATGGTCG GTTACCCAGA TTGACATAAC TTTTGACAAG CCTGAAGGTA TTCAAGGTTA CGTCAACACC ATTGACAGAA TCTGCCAACA GGCTTCGAAG GCTATCGCTG ACAACAAGAA GATTATTATC TTGAGTGACA AGGCTACTTC TGCAACCAGA GTCCCTATCT CTGCTTTGAT TGCCACTGGT GCTGTGCACC ACCACTTGGT TAGACAAAAG CAGCGTTCCA AGGTGGCTCT TATTATTGAA ACCGCTGAAG CTAGAGAGGT GCACCATGCT TGTTGTTTGG TTGGATACGG TATCGATGGT ATCAACCCTT ACTTGGCCAT CGAGACTCTT ATCAGAATGA GGGAAGAAAA TTTGTTGAAG AACGAAGCAC TCACTCCTGA AAAGATAATC CACAACTATA AGGATGCTAT CGACCACGGT ATCTTGAAGG TTATGTCTAA GATGGGTATC TCTACCTTGG CCTCCTACAA GGGTGCACAA ATTTTCGAAG CTCTTGGTAT CGACAACTCT GTCATTGACA GATGTTTCGC TGGTACTGCT TCCAGAATTA AGGGTGTCAC TTTCGAGTAC ATCGCTCAAG ACGCCTTCTC AATGCACGAA AGAGGTTTCC CAAGCAGAGA CACCATCAAG CCTGTTGGTC TTCCAGAAAC TGGCGAATAC CATTGGAGAG ATGGCGGTGA TGCACACGTC AACGAACCAG CTGCTATTGC TTCTCTTCAA GACGCTGTCA AGAACAAGAA TGAAAGAGCC TACGAAGCCT ACTGTAAGAA GGAGCACGAA GCTATTAGAA ACTGTACCTT AAGAGGATTG CTTGACTTTG ATGTTGATGC CAGCACTTCC GTTCCAATTG ATCAGGTCGA ACCATGGACT GAAATTGTCC GTCGTTTCTT CACAGGTGCC ATGTCTTACG GTTCCATTTC CATGGAAGCT CACTCAACTT TGGCTGTTGC CATGAACAGA TTGGGTGGTA AGTCGAACAC TGGTGAAGGT GGAGAAGACT CTGCCAGATC TATTGTTAGC GAAAATGGTG ACACGATGCG TTCTGCTATC AAGCAAATTG CTTCAGGCCG TTTTGGAGTT ACTTCCTATT ATTTGGCTGA TGCCGACGAG TTGCAAATCA AAATGGCTCA AGGTGCTAAA CCCGGTGAAG GTGGGGAATT ACCTGGCCAC AAGGTCAGTG CCCAGATTGG TAAGACTAGA CACTCTACTC CTGGTGTTGG TTTGATATCT CCACCCCCCC ATCACGATAT CTACTCTATT GAGGATTTAA AGCAATTGTT GTACGATTTG AAGTGTGCCA ACCCAAGAGC TCGTACTTCT GTGAAGTTGG TTTCTGAAGT CGGTGTTGGT ATTGTTGCTG CTGGTGTAGC AAAGGCCGGT TCCGAAAACA TCTTGGTTTC TGGTGGTGAT GGTGGTACGG GTGCTGCCAA GCTTACTTCT ATCAAGTACG CTGGACTTCC ATGGGAACTT GGTTTGGCTG AATCGCACCA GACTTTGGTC TTGAACGACT TGAGAGGCAG AGTTATCTTG CAAACTGACG GTCAAATTAA GACTGGTCGT GATATTGCCA TTGCCTGTTT GCTTGGTGCC GAAGAGTGGG GGTTTGCAAC AACTCCTTTG ATCGCCATGG GCTGTATCAT GATGAGGAAA TGCCAGACCA ATGCCTGCCC TGTTGGCATT GCTACTCAAG ACCCAGAGCT TCGTAAAAAG TTTGAAGGTA CTCCTGAGCA CGTCATCAAC TTCTTCTACT ACTTGGCCAA CGACTTGAGA AACATCATGG CAAAATTGGG TTACAGAACC ATCAACGAGA TGGTGGGTAG AACCGAGAGA TTGAAGGTAA GAGAAGACTT CAGAAACACA AAGAACGCCA ATATCGACTT GTCGCCAATC TTGACACCAG CCCATACCAT TAGACCTGGT GTTGCTACCT ACTGTGTCAG AAAACAAGAT CACAGATTGC ACGTCAGAAT TGACAACAAG TTGATCGACG AATCTGAGTT GACTTTAGCC AAGGGTTTAC CAGTCACCAT TGACTGTGAT GTCGTCAACA CTGACAGAAC CTTGGGTACC ACTTTGTCTT ACCGTGTTTC CAAGACTTTT GGTGAAAACG GTTTGCCTCA TGATACTATT CATGTCAATG CTAAGGGTTC TGCCGGTCAA TCATTCGGTG CCTTCTTGGC TGCTGGTATC ACTTTGGAGT TAGAAGGTGA CGCCAACGAT TACATTGGTA AGGGTTTGTC TGGTGGTAGA ATCATTGTCT ACCCTCCAAA GGAATCCAAG TTCAAAGCGG AAGACCAGAT TATTGCAGGT AACACCGCCT TCTTTGGTGC CACTTCCGGT TCTGCGTTCA TCAGAGGTGT AGCTGCTGAA AGATTTGCTG TTAGAAACTC TGGTGCTACC ATTGTGACTG AAGGCACTGG TGACCATGGT TGTGAGTACA TGTCCGGTGG TAGAGTTGTC GTTTTGGGTG GTACTGGAAG AAACTTTGCT GCAGGTATGT GCGGTGGTAT TGCTTATGTT TTAGACATGG CTCAAGACTT CAATAAGAGA GTTAACACTC ATACCGTGGA ATTATCTCAA GTCACTGAAC CATCTGAAAT TGCTTTCTTA AGAGGTTTGA TCGAAGACCA CCGTCACTAC ACCAATTCAG AGGTAGCTGA TCGTATCTTG AACGACTTCA ACAGAATCTT GCCACGTTTT GTTAAGGTTT TGCCTTTCGA CTACAAGAAG GTTCTTGAGA AGGAAAAGCA AAAGGCCGAG GAAGCTAAGA AGAACGAGTT AAATACATTC TTTAAGCTGA TCAAGGAAGA CCCAGAAGCC GATGTCACGA ACGGTGAGGC TGCCAAGATC AAGAAGGGGC ATGTTCATAT CACCTCCAAG GCTAAAGATG GCCACAAGGA ACCAAAGGTG TTGGATGTTG AAGACACTAT CTTGGACACC GAAGTTGAAA AGAAGGCTCC AGTTAAGTTG GACAAGCTTA AAGGCTTCAT GAAGTACAAG CGTCGTAACG AAAAGTATAG AGACGCGAAG GCCAGAGCCA AGGACTGGAA CGAAATGACT TCCAGATTGT CCAAGGATGA GTTAAAACAT GAGACAGCTA GATGTATGGA CTGTGGTGTT CCCTTCTGTA CTTCGGACAC TGGATGTCCT ATTTCCAATG TCATCCCGAA GTGGAATGAG TTGGTCTTTC AGGACAGATG GTACGATGCT TTGCAGAGAT TGTTGATGAC CAACAATTTC CCTGAATTCA CTGGTAGAAT TTGTCCTGCT CCTTGTAACG GTGCTTGTGT TTTAGGTATC ATCGAAGACC CAGTCAACAT TAAGTCTGTT GAGTGTGCCA TTATCGATCA CGGTTTCGAA CAGGGCTGGA TCAAGCCTCA ACCACCTACT CACAGGACAG GCAAGACGGT AGCTGTCATT GGTTCTGGTC CCTCTGGTTT GGCTGCTGCA GACCAATTGA ACAAGGCTGG CCACAAGGTC ACTGTCTACG AAAGAAGTGA CAGACCGGGC GGTTTGTTGA TGTACGGTAT TCCTAATATG AAGTTAGACA AAAAGATTGT TAAGAGAAGG ACAGACTTAC TCGCTGCTGA AGGTATTGAG TTTGTTTGCA ACACCACCGT TGGTGAAGAC ATCACTGTCG AAGAGTTGAA AGCCTCTAAT GACGCTGTTG TTTTCGCTGT GGGCTCCACA ATTCCAAGAG ACTTGAAGAT TCCAGGTCGT GAATTGAACA ATATCAATTT TGCCATGCAA TTGTTGCACT CTAACACAAA GGCTTTATTG GACGATCAGT TGGAAGACAT CAGAAAGAAC TTGGAAGGTA AGCATGTTGT TGTCATTGGT GGTGGTGATA CTGGTAACGA TTGTTTGGGT ACTTCCACCA GACACGGTGC CAAGTCTGTG ACCAACTTTG AATTGTTGCC ACACCCACCT GCCACCAGAC CAAAGGACAA TCCTTGGCCA CAATGGCCAA GAATCTTCAG AGTCGACTAC GGTCACACTG AAGTTGCCGC TCACTACGGC AAGGACCCAA GAGAATATTC GATCTTGTCA AAGGAATTCG TTGACGATGG CGAAGGTAAT GTCAAGGGTA TCAAGACCGT GAGAGTTGAA TGGAAGAGAA CCGACTCTGG AGCTTGGCAG ATGGCAGAAG TTCCAGGCAG TGAAGAGTTC TTCCCTGCTG ATGTTGTTCT CTTGTCGATG GGTTTTGTTG GTCCAGATGC AGACAACTTG GAAGTTTCCA AGACCAAGAG AGGAACGATC ACCACTGTTG ACCCTAACGT GTACAGAGTC AGCGAGGACG ACAACCTCTT TGCCGCCGGT GACTGTAGAA GAGGTCAATC TTTGGTTGTC TGGGGTATTC AAGAAGGTAG ACAATGTGCT AGAGAAGTCG ACAACTTCTT AATGGGCGCC ACCAGATTGC CAGGTAACGG TTCAATTGAG CAGAGAAACT ACAAATTGTT AGAGGAGTTA GCTGAAAAGG TTTAA
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Protein sequence | MSSYLPQEEF QTNIYQYDET PENTSWASAL PVAKGLYNPE YEKDACGVGF TCHLKGEASH KIISDCRNLL CNMTHRGGEL NPKDGDGAGL LSSIPHKFLK REFKYHCNID LPPLGQYGTG NIFFKKDDAV FEKSKSTFES IADSLGLKVL GWRKVPHDSS ILGPASLSRE PYILQPTVVL SELAGQNDIA DDVFVSKYQK DFEKKLYILR KQSSHSIGLH NWFYICSLSN KTIVYKGQLA PNQVYAYYHD LVNADYECHF ALVHSRFSTN TFPSWDRAQP LRLAAHNGEI NTLRGNKNWM RAKEGVMSSK LFGEEIDKLF PIIEEGGSDS AAFDNVLELL TVNGVLSLPE AVMLMIPEAW QNDTHIDPKK KAFYEWAACL MEPWDGPALF TFADDRYCGA NLDRNGLRPC RYYVTDDDRI ICASEVGVIE IEPEKILQKG RLQPGRMLLV DTKEGRIVDD RELKNNVASR FDFKSWVLGN MISLGDLIEK LQAREIDLSD KVSDTSYSVQ SDPRLVAFGY SHEQASLVLA PMAEGNEALG SMGNDNALAC ISEQPKLLYE YFRQLFAQVT NPPIDPIREE IVMSLECYVG PQGNLLEMKP DQCNRLLLKS PVLSNSELNA IRNIETVYPK WSVTQIDITF DKPEGIQGYV NTIDRICQQA SKAIADNKKI IILSDKATSA TRVPISALIA TGAVHHHLVR QKQRSKVALI IETAEAREVH HACCLVGYGI DGINPYLAIE TLIRMREENL LKNEALTPEK IIHNYKDAID HGILKVMSKM GISTLASYKG AQIFEALGID NSVIDRCFAG TASRIKGVTF EYIAQDAFSM HERGFPSRDT IKPVGLPETG EYHWRDGGDA HVNEPAAIAS LQDAVKNKNE RAYEAYCKKE HEAIRNCTLR GLLDFDVDAS TSVPIDQVEP WTEIVRRFFT GAMSYGSISM EAHSTLAVAM NRLGGKSNTG EGGEDSARSI VSENGDTMRS AIKQIASGRF GVTSYYLADA DELQIKMAQG AKPGEGGELP GHKVSAQIGK TRHSTPGVGL ISPPPHHDIY SIEDLKQLLY DLKCANPRAR TSVKLVSEVG VGIVAAGVAK AGSENILVSG GDGGTGAAKL TSIKYAGLPW ELGLAESHQT LVLNDLRGRV ILQTDGQIKT GRDIAIACLL GAEEWGFATT PLIAMGCIMM RKCQTNACPV GIATQDPELR KKFEGTPEHV INFFYYLAND LRNIMAKLGY RTINEMVGRT ERLKVREDFR NTKNANIDLS PILTPAHTIR PGVATYCVRK QDHRLHVRID NKLIDESELT LAKGLPVTID CDVVNTDRTL GTTLSYRVSK TFGENGLPHD TIHVNAKGSA GQSFGAFLAA GITLELEGDA NDYIGKGLSG GRIIVYPPKE SKFKAEDQII AGNTAFFGAT SGSAFIRGVA AERFAVRNSG ATIVTEGTGD HGCEYMSGGR VVVLGGTGRN FAAGMCGGIA YVLDMAQDFN KRVNTHTVEL SQVTEPSEIA FLRGLIEDHR HYTNSEVADR ILNDFNRILP RFVKVLPFDY KKVLEKEKQK AEEAKKNELN TFFKSIKEDP EADVTNGEAA KIKKGHVHIT SKAKDGHKEP KVLDVEDTIL DTEVEKKAPV KLDKLKGFMK YKRRNEKYRD AKARAKDWNE MTSRLSKDEL KHETARCMDC GVPFCTSDTG CPISNVIPKW NELVFQDRWY DALQRLLMTN NFPEFTGRIC PAPCNGACVL GIIEDPVNIK SVECAIIDHG FEQGWIKPQP PTHRTGKTVA VIGSGPSGLA AADQLNKAGH KVTVYERSDR PGGLLMYGIP NMKLDKKIVK RRTDLLAAEG IEFVCNTTVG EDITVEELKA SNDAVVFAVG STIPRDLKIP GRELNNINFA MQLLHSNTKA LLDDQLEDIR KNLEGKHVVV IGGGDTGNDC LGTSTRHGAK SVTNFELLPH PPATRPKDNP WPQWPRIFRV DYGHTEVAAH YGKDPREYSI LSKEFVDDGE GNVKGIKTVR VEWKRTDSGA WQMAEVPGSE EFFPADVVLL SMGFVGPDAD NLEVSKTKRG TITTVDPNVY RVSEDDNLFA AGDCRRGQSL VVWGIQEGRQ CAREVDNFLM GATRLPGNGS IEQRNYKLLE ELAEKV
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