Gene PICST_87356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_87356 
Symbol 
ID4836630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp326748 
End bp327487 
Gene Length740 bp 
Protein Length227 aa 
Translation table12 
GC content44% 
IMG OID640387945 
Productpredicted protein 
Protein accessionXP_001382828 
Protein GI126132606 
COG category 
COG ID 
TIGRFAM ID[TIGR03401] HD domain protein, cyanamide hydratase family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CTTTCATTGA CTGATTTTTA GCAATGTCTT CCTACGGTTT TGTCAAGATT TCCAGAGACG 
TCAAGCTTGC GGTTCCTAAC CCTTCGGCTC CCACGGCTCA GACAGATGTC GATTTGCCAT
CGACTCCTTT AGCTCAGTAT GTGTTGGAGT ATGTTACCAG ACGTTTACCA AAGGAAGTAT
TGAACCACTC GCTCAGAGTA TTTTTGTACA GTAGAGCTAT CATCAAGGAC CAATTCCCAG
AATGGGACTT GGACTTGGAA GTGGTCTTTG TCACCAGCTT GTTGCACGAC ATCGCTACTA
CTGACGAGAA CATGAAGGCC ACCAAGATGT CGTTTGAATT CTACGGGGGC ATCATTGCTC
GTGATTTGAT TTTAAACAAG AACGCAAACC AGGACTATGC TGAAGCTGTC AGCGAGGCCA
TCATCAGACA CCAGGACTTG GGCGAGTCTG GCTACATCAC TACCTTAGGG TTGATTTTGC
AGATCGCAAC CATCTTAGAC AATGTAGGCT TGCATACGCA CTTGATCCAT CCAGTCACTT
TGAGTGCTGT TAACAAGAAG TTCTCTAGAG AAGGCTGGTT GACCTGTTTT GCCCATGCCA
TAGACAGGGA AAACGAAGAA AAGCCATGGG GCCACACCAG TGCTTTGGGT ACGCATAAAT
TCAGAGAAGA TGTTTTGGCT AACAGCTTTA CATATGAGAA ATTGTAGCTA TGAATATAAT
AAATATATAT GAGTACATTG
 
Protein sequence
MSSYGFVKIS RDVKLAVPNP SAPTAQTDVD LPSTPLAQYV LEYVTRRLPK EVLNHSLRVF 
LYSRAIIKDQ FPEWDLDLEV VFVTSLLHDI ATTDENMKAT KMSFEFYGGI IARDLILNKN
ANQDYAEAVS EAIIRHQDLG ESGYITTLGL ILQIATILDN VGLHTHLIHP VTLSAVNKKF
SREGWLTCFA HAIDRENEEK PWGHTSALGT HKFREDVLAN SFTYEKL