| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_87280 |
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| Symbol | |
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| ID | 4836760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | - |
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| Start bp | 1085740 |
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| End bp | 1089561 |
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| Gene Length | 3822 bp |
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| Protein Length | 1204 aa |
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| Translation table | 12 |
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| GC content | 44% |
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| IMG OID | 640388075 |
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| Product | predicted protein |
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| Protein accession | XP_001382986 |
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| Protein GI | 150864245 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0864133 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATTTCTGGCA GCTGGATAGT GATCATAACA ATTGATCTCC TCTAGACTCT ATAGAACGTT
GCAAGATCGT CGTAACAGTT TTTCGAAGTT TTCGGATTCT TCAAGTTACG ATTACGATTT
TTCAGTTTCT GTGTGTCCAG ATCTATTAGC TAGTAGACAT CATGAAGATG CTCACCAAGT
TTGAGTCCAA GTCGTCCCGG GCTAAGGGAG TGGCTTTCCA TCCCAAGAGA CCTTGGGTTT
TAGTCTCGTT GCACTCTTCC ACCATTCAGT TATGGGATTA CCGTATGGGA ACGTTGATTG
ACCGATTCGA GGATCACGTT GGCCCTGTTA GATGTGTAGA CTTCCATCCA ACGCAGCCTT
TATTTGTTTC AGGAGGTGAT GATTATTCGA TTAAGGTCTG GTCTTTGAAT ACGCGTAAGT
GTATTTTCAC GTTGAACGGG CATTTGGATT ATATCCGTAC TGTTTCGTTC CATCACGACT
TGCCTTGGAT CATTTCGTGT TCTGATGACC AGACAATCCG AATCTGGAAT TGGCAGAACC
GTCAGGAAAT CGCCTGCTTG ACTGGTCACA ACCACTACGT GATGTCTGCG CAGTTCCATC
CAACAGAAGA CTTGATTGTG TCGGCTTCGT TGGATCAGAC TGTGAGAGTC TGGGACATTT
CGGGCTTGCG CAAGAAGCAC TCAGCTCCTA CCTCGTCCAT GAGATCGTTT GAAGACCAGT
TGCAGAGACA GCAGTTGCCC CAGCAAGATA TTTTTGGTAA CGTAAACGCC ATTGTGAAGT
ACGTATTAGA AGGACACGAT AAGGGTGTCA ATTTCGCTTC CTTTCATCCT ACGTTACCTT
TGATTGTCTC TGCTGGTGAT GACCGCGTTG TCAAGTTGTG GAGAATGAGC GACACGAAGG
CATGGGAGGT CGATACGTGT CGTGGACATA CTGGCAACGT CTTGAGTGCA GTTTTCCACC
CACACGAGGA TTTGATTCTC TCTGTTTCAG ACGACAAGAC CATCAGAGTC TGGGACTTGA
ACAAGAGAGT GCCTATCAAG CAGTTCAGAA GAGAACTGGA TCGGTTCTGG TTGATTGCTT
CTCACCCAAC TATCAACTTA TTCGCTGCGT GCCATGATTC TGGAGTAATG GTGTTCAAGT
TGGAAAGAGA AAGACCAGCC CATACCATCT CTCAGAACAA GCTCTTGTAT GTTAATGCGG
AGAAACAGGT TCAATCATAC GACATCCAGA GAAACGAGAA CTCGTTGCCA ATGTTGTCGT
TGAAGAAGAT CGGTAAGACC TGGTCCTTCA TGAGAACCAT GTCCTACAAC CAATCTGACA
ACTCTATCTT GGTGACTCAT GGTGAGGGGG ACAACTCGAA CTACGCTTTG ATCTCCTTAC
CTAAACACGT AACCGGTGCT ATTGAACCTA CAGACGTCAG ACAAGGTGAA GGTAACTTTG
CCTGTTTCAT AACCAGAAAC AGATTCATCA GTTTCATCAA ATCGTCCAAG ACTTTACATG
TTAAAGACAT GAACAATAAC ATCACCAAGA CCATTCAATT AGACTCCTCA GTAACTGATG
TATTGTATGG TGGTCCCGGT AGAGTTTTGT TGGTCAAGAG CCACTCGATC ACCAACTATG
ATGTTCAACA GAGAAAGGAG TTATCTGAAC TCAGTGTTAA CAACGTAAAA TACGTATCGT
GGTCGAATGA TGGCCAGTAC TTGGCATTGT TATCTAAACA TACTATCACC ATAGCCAACA
AAGACTTGGA ATTGATCACC TCCATGCATG AAACAATCAG AATCAAGAGT GCTGCATGGG
ATGACTCTGG AGTCTTGTTG TACTCAACGT TAAACCACAT CAAGTACACC TTGTTGAATG
GTGACAACGG TATCATCAAG ACTTTGGAAA ACACCTTGTA CATTACCAAG ATTGTACAAA
GACAGGTTTA CTGTTTGAAC CGTAGTGGTG AAGTTGAGGT TATCACCATT GACCCAACTG
AATACAGGTT TAAGAAGTCG TTGGTCAACA AGAACTTCAA CGAAGTTTTG AGAATTATCA
AGAACTCCAA CTTGGTCGGC CAAAATATCA TCGCCTACTT GCAGAAGAAG GGCTACCCTG
AAGTTGCTTT GCAGTTTGTC CAAGACCCTG AGACCAGATT TGAATTAGCC TTGGAATGTA
GCAACTTACA AGTAGCTCTT GAACAGGCAA AGATCTTGAA CAACAACACC ATCTGGGAGA
AGTTGGGTGA CGAGGCATTA AACCAAGGTA ACTTTGAAGT AGTTGAGTTT GTTTACCAGC
AGTTACATTT GTTTGACAAG TTATCATTCT TATACACGTA CAAGGGTGAT AAGGAAAGAT
TGAGCAAGAT GTCCACTATT GCCGAACACC GTGGTGACTA TTCCGCCTTG GTCCAGAATA
CTTTGTACAA CAATGATATC AAAAAGAGAT GCGAAGTGTA CATTCAAGGT GGTATGTTAC
CATTGGCTTA TGTATTGGCT AAATCAAATG GTCTAGTTGA ATTGGCTAAG CAGATCTTGG
AGGAAGCTGG TGTAGAAGAA AAGGATGTAC AATTGCCAGA GATTGGTGAG GTAGTTCCAT
TGCCTGAACC TCTTGCTGAG CCTATAGGCA ACTGGCCATT GAAGGAGTCG TCTTTGTCCT
TCTTTGAGAA TGCCCTTTTG AATGGTCAGG TCGAAAACTT GTCGATTGAA GAAGACAAGG
CTGTAGAGCA GTTTGAAGAC GCATCGGCAT CTATTGCAGA CTTCAATGAT GAAGATGAAG
TCTTCGAGGA TGACGCGGGA GCCTGGGATT TGGACGATGA CTTGGACATT CCAGAAGATG
AAGCTCCTGT TATTGATACT GCCTTCCCAG CTGCTCCTAC TGCCGAGGGA GAGATTGGAT
ACTGGCTCCG TAACGTCAAA ACTGCTGGTG GTTATGCTGC TGCGGGTGCA TTTGATCAGG
CAGCTTCGTT ATTGAACAAG CAATTGGGAT TGGTGAATTT CGAGCCATTG CGTAAGAACT
TTTTTGAAGT GTACTCATCT TCAAAGTTGT ACTTGCCAGG TATCGATGAC TTGCCACCAA
TGAAGAACTA CATCAGACAA GACAACGACG AAGATAACCC CAGCAAGTTC AAGCCGTTTG
TTCCTGGATA TGACAAGTTG GAAGAACGTT TGGCTGTAGG CTTCAAACAT TTCAATGCCA
ACAACTTGGA AGACGCCATA GCCCAGTTCA GAGACATTAT CTACAGCATT GTGTTGTTGA
CCGTTGAAGA TGATGAACAG GAAGCCAAGT GTAGGGACGT ATTGACTTTA TGTCGTGAGT
ATATCTTGGG ATTGTCAATT GAATTGGCCC GTCGTGCTTT GGATCCAGAC GATATCCAAC
GTAACTTAGA GTTGGCTGCT TACTTCACCA AAGCCGAACT TCAGAATCCT CACAAGCTCA
ATGCATTGCA AGTGGCCATG ACACAAGCAT TTAAGCACAA GAACTTTGCC AGTGCCTCCT
ACTTTGCAGA TGAAATCTTG AAGCTTTCTC CTTCTGGCCC CAGAGCCGAA CGTGCACAAA
AAGTCAAGAC TAGAGCCGAC ACCATTGCCA GCGATGCTGT CGATATCAAC TTTGACCCCT
ACGCCGAATT CGACATTTGT GCTGCTACCT ACACTCCTAT CTTCCGCGGC GAGCCTTCTG
TTACCGAAGA GTTGGTTGGT GCAAAGTACA AGCCTGAGTA CAGGGGCACC CTCTGTAAGA
TCACCGGAAT CACTCAGGTT GGAGCCCAGG CCTCAGGTTT GCGCATAATA GGGTAGACTA
TGTTGTTTGA TTTTTAAAAG CTATTTTATA TACATTTATG TG
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| Protein sequence | MKMLTKFESK SSRAKGVAFH PKRPWVLVSL HSSTIQLWDY RMGTLIDRFE DHVGPVRCVD
FHPTQPLFVS GGDDYSIKVW SLNTRKCIFT LNGHLDYIRT VSFHHDLPWI ISCSDDQTIR
IWNWQNRQEI ACLTGHNHYV MSAQFHPTED LIVSASLDQT VRVWDISGLR KKHSAPTSSM
RSFEDQLQRQ QLPQQDIFGN VNAIVKYVLE GHDKGVNFAS FHPTLPLIVS AGDDRVVKLW
RMSDTKAWEV DTCRGHTGNV LSAVFHPHED LILSVSDDKT IRVWDLNKRV PIKQFRRESD
RFWLIASHPT INLFAACHDS GVMVFKLERE RPAHTISQNK LLYVNAEKQV QSYDIQRNEN
SLPMLSLKKI GKTWSFMRTM SYNQSDNSIL VTHGEGDNSN YALISLPKHV TGAIEPTDVR
QGEGNFACFI TRNRFISFIK SSKTLHVKDM NNNITKTIQL DSSVTDVLYG GPGRVLLVKS
HSITNYDVQQ RKELSELSVN NVKYVSWSND GQYLALLSKH TITIANKDLE LITSMHETIR
IKSAAWDDSG VLLYSTLNHI KYTLLNGDNG IIKTLENTLY ITKIVQRQVY CLNRSGEVEV
ITIDPTEYRF KKSLVNKNFN EVLRIIKNSN LVGQNIIAYL QKKGYPEVAL QFVQDPETRF
ELALECSNLQ VALEQAKILN NNTIWEKLGD EALNQGNFEV VEFVYQQLHL FDKLSFLYTY
KGDKERLSKM STIAEHRGDY SALVQNTLYN NDIKKRCEVY IQGGMLPLAY VLAKSNGLVE
LAKQILEEAG VEEKDVQLPE IGEVVPLPEP LAEPIGNWPL KESSLSFFEN ALLNGQVENL
SIEEDKAVEQ FEDASASIAD FNDEDEVFED DAGAWDLDDD LDIPEDEAPV IDTAFPAAPT
AEGEIGYWLR NVKTAGGYAA AGAFDQAASL LNKQLGLVNF EPLRKNFFEV YSSSKLYLPG
IDDLPPMKNY IRQDNDEDNP SKFKPFVPGY DKLEERLAVG FKHFNANNLE DAIAQFRDII
YSIVLLTVED DEQEAKCRDV LTLCREYILG LSIELARRAL DPDDIQRNLE LAAYFTKAEL
QNPHKLNALQ VAMTQAFKHK NFASASYFAD EILKLSPSGP RAERAQKVKT RADTIASDAV
DINFDPYAEF DICAATYTPI FRGEPSVTEE LVGAKYKPEY RGTLCKITGI TQVGAQASGL
RIIG
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