Gene PICST_87256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_87256 
Symbol 
ID4837242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp2686717 
End bp2687091 
Gene Length375 bp 
Protein Length67 aa 
Translation table12 
GC content40% 
IMG OID640388557 
Productpredicted protein 
Protein accessionXP_001383267 
Protein GI126133484 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2053] Ribosomal protein S28E/S33 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CATAATCATA GAAACATACA AAATGGACGC TAAAACCCCA GTCACTTTAG CCAAGGTCAT 
CAAGGTCTTA GGTAGAACCG GTTCCAGAGG TGGTGTCACC CAGGTCAGAG TCGAATTCTT
GGAAGATGCT TCCAGAACCA TTGTCAGAAA CGTCAAGGGT CCTGTCAGAG AAAACGACAT
CTTGTGTTTG ATGGAATCTG AAAGAGAAGC CAGAAGATTG CGTTAAGAGT CATGGAGCTG
TTGGTTTTGT CATATTTGTA AATTAGGAAC GAATAACATC CAGTATCTAC CAGGGATTTC
TCCATTAAAA GTTTGTTGTT AAGGCTACTC TGTTAGGTAT CAGTTTATTC AACATATAAT
AAAGGTTTAG CATAG
 
Protein sequence
MDAKTPVTLA KVIKVLGRTG SRGGVTQVRV EFLEDASRTI VRNVKGPVRE NDILCLMESE 
REARRLR