Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_87252 |
Symbol | TDH1 |
ID | 4836918 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | - |
Start bp | 812949 |
End bp | 814030 |
Gene Length | 1082 bp |
Protein Length | 333 aa |
Translation table | 12 |
GC content | 43% |
IMG OID | 640388233 |
Product | Glyceraldehyde-3-phosphate dehydrogenase |
Protein accession | XP_001382928 |
Protein GI | 126132806 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
TIGRFAM ID | [TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TAGTAATATA AATAAAATTT TCAAGATGGT TACAATTGGT ATTAATGGGT TTGGACGTAT CGGAAGATTA GTGTTAAGAA TCGCTTTGGA AAGACCCGAC ATTGATATCG TCGCTGTTAA TGATCCCTTC ATTGCTCCCG ATTATGCAGC CTACATGTTC AAGTACGACT CTACCCATGG CAGATACAAG GGCACAGTTG AATCTGATGC TGAAAACATC ATTATCAACG GGAAGAAGAT CAGAGCCTTT CAAGAGAAAG ACCCAGCTAA TATCCCTTGG GGAAAGGTAG GTGTCGACTA TGTTGTTGAG TCTACAGGTA TCTTTGCGAA GTTGGCTGGT GCACAAAAGC ACATAGACGC TGGTGCTAAG AAAGTTATTA TCACTGCTGT CACACCAGAT ACACCAATGT TCGCTATTGG TGTGAATGAA GATAAGTACA CTCCTGACAT GAACATCATA TCCAATGCCT CGTGTACCAC CAACTGTTTG GCTACTTTGG CAAAGGTTAT CAATGACAAC TTTGGAATTG AAGAAGGTTT GATGACTACT GTCCACTCTA TCACTGCTAC TCAAAAGACA GTCGACGGCC CATCTCAAAG GGACTGGAGA GGAGGAAGAA CCGCTTCTGG TAACATCATT CCTTCTTCTA CTGGTGCTGC CAAGGCTGTC GGAAAGGTGA TTCCAGAGTT GAATGGTAAG TTGACTGGTA TGTGTTTGAG AGTCCCAACC GTGGATGTTT CTGTAGTCGA CATGACAGTG AAATTGGCTA GACCAGTTAC CTACGAGGAA ATCTGTGCTG CTGTGAAGAA AGCCTCAGAA GGTGCCTTGA AGGGCATCAT TGGGTACACC GACGAAGCCG TCGTTTCTAG CGATTTCCTC AGCTCCACCT ACTCGTGTGT GTTCGATGCC AAGGCTGGTA TATTGCTTTC TCCTCAATTC GTCAAGTTGA TTGCTTGGTA TGACAATGAG TACGGTTACT CAGCTAGAAT TGTCGACTTG TTGGAAAAGG TTGCGGCAAC TAAATAGCCG TAGTATTTGT TTTTTCATAT ATATATTTCA CTATGAACAT CTTTTATTGT AT
|
Protein sequence | MVTIGINGFG RIGRLVLRIA LERPDIDIVA VNDPFIAPDY AAYMFKYDST HGRYKGTVES DAENIIINGK KIRAFQEKDP ANIPWGKVGV DYVVESTGIF AKLAGAQKHI DAGAKKVIIT AVTPDTPMFA IGVNEDKYTP DMNIISNASC TTNCLATLAK VINDNFGIEE GLMTTVHSIT ATQKTVDGPS QRDWRGGRTA SGNIIPSSTG AAKAVGKVIP ELNGKLTGMC LRVPTVDVSV VDMTVKLARP VTYEEICAAV KKASEGALKG IIGYTDEAVV SSDFLSSTYS CVFDAKAGIL LSPQFVKLIA WYDNEYGYSA RIVDLLEKVA ATK
|
| |