| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_87252 |
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| Symbol | TDH1 |
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| ID | 4836918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | - |
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| Start bp | 812949 |
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| End bp | 814030 |
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| Gene Length | 1082 bp |
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| Protein Length | 333 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640388233 |
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| Product | Glyceraldehyde-3-phosphate dehydrogenase |
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| Protein accession | XP_001382928 |
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| Protein GI | 126132806 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
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| TIGRFAM ID | [TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TAGTAATATA AATAAAATTT TCAAGATGGT TACAATTGGT ATTAATGGGT TTGGACGTAT
CGGAAGATTA GTGTTAAGAA TCGCTTTGGA AAGACCCGAC ATTGATATCG TCGCTGTTAA
TGATCCCTTC ATTGCTCCCG ATTATGCAGC CTACATGTTC AAGTACGACT CTACCCATGG
CAGATACAAG GGCACAGTTG AATCTGATGC TGAAAACATC ATTATCAACG GGAAGAAGAT
CAGAGCCTTT CAAGAGAAAG ACCCAGCTAA TATCCCTTGG GGAAAGGTAG GTGTCGACTA
TGTTGTTGAG TCTACAGGTA TCTTTGCGAA GTTGGCTGGT GCACAAAAGC ACATAGACGC
TGGTGCTAAG AAAGTTATTA TCACTGCTGT CACACCAGAT ACACCAATGT TCGCTATTGG
TGTGAATGAA GATAAGTACA CTCCTGACAT GAACATCATA TCCAATGCCT CGTGTACCAC
CAACTGTTTG GCTACTTTGG CAAAGGTTAT CAATGACAAC TTTGGAATTG AAGAAGGTTT
GATGACTACT GTCCACTCTA TCACTGCTAC TCAAAAGACA GTCGACGGCC CATCTCAAAG
GGACTGGAGA GGAGGAAGAA CCGCTTCTGG TAACATCATT CCTTCTTCTA CTGGTGCTGC
CAAGGCTGTC GGAAAGGTGA TTCCAGAGTT GAATGGTAAG TTGACTGGTA TGTGTTTGAG
AGTCCCAACC GTGGATGTTT CTGTAGTCGA CATGACAGTG AAATTGGCTA GACCAGTTAC
CTACGAGGAA ATCTGTGCTG CTGTGAAGAA AGCCTCAGAA GGTGCCTTGA AGGGCATCAT
TGGGTACACC GACGAAGCCG TCGTTTCTAG CGATTTCCTC AGCTCCACCT ACTCGTGTGT
GTTCGATGCC AAGGCTGGTA TATTGCTTTC TCCTCAATTC GTCAAGTTGA TTGCTTGGTA
TGACAATGAG TACGGTTACT CAGCTAGAAT TGTCGACTTG TTGGAAAAGG TTGCGGCAAC
TAAATAGCCG TAGTATTTGT TTTTTCATAT ATATATTTCA CTATGAACAT CTTTTATTGT
AT
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| Protein sequence | MVTIGINGFG RIGRLVLRIA LERPDIDIVA VNDPFIAPDY AAYMFKYDST HGRYKGTVES
DAENIIINGK KIRAFQEKDP ANIPWGKVGV DYVVESTGIF AKLAGAQKHI DAGAKKVIIT
AVTPDTPMFA IGVNEDKYTP DMNIISNASC TTNCLATLAK VINDNFGIEE GLMTTVHSIT
ATQKTVDGPS QRDWRGGRTA SGNIIPSSTG AAKAVGKVIP ELNGKLTGMC LRVPTVDVSV
VDMTVKLARP VTYEEICAAV KKASEGALKG IIGYTDEAVV SSDFLSSTYS CVFDAKAGIL
LSPQFVKLIA WYDNEYGYSA RIVDLLEKVA ATK
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