Gene PICST_87040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_87040 
SymbolFRE3.1 
ID4836723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp385775 
End bp387386 
Gene Length1612 bp 
Protein Length524 aa 
Translation table12 
GC content43% 
IMG OID640388038 
ProductFerric reductase, NADH/NADPH oxidase transmembrane component 
Protein accessionXP_001382308 
Protein GI150863738 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.92947 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTGGT ATTCTGTTGA TTCGGAAATT GAATCGTTGG AACGAAGACA TGCTGGTCAC 
CACCACACAG TGAACATAAA GTATGGATAC GTGATATTAG CACTTTCTAT TGTCCACATG
GTGTTGAGCA TTTCTGGGAA AAAGCTATAC TTCAAGAACT GGGCTGAAAC AGGAAGAGCT
TCCAGCTGGT GGAGAAGTGT TGTGTCGATT CCTTTTTGGG TGTCGACTTT GGTCTGGTTG
GCCATATTTG CATTCCTCAG CATTTTCCAC ATCGAAGAAC TTTCAGAGAA TTACACCACA
GCAGTCAAGA GACTCGGAAG AATGGCATAC TGCTTGGTTC CTTTCACGAT CTTCATAAGT
CTCAGACCTC CCAATACTGT AGGCTACCAA AGTGGCTACT ATTTGGAGAA GTTGAATCTT
CACAAATGGA TCTCAAGGTT GATCTTTGCT ACAGCGATTG GCCACGGTCT TGGATTCTTG
TACAAATGGA CGAAAGAAGG TGCTTTGGCA GAAAAGATCT TTAAGTTCGA CAATTTCCTT
GGAGTCACCG TTTTTGCCTT GATGCCGGTG CTTATATTTG CTTCTGTAAA CGTCATGAGA
AGAAGAAATT ATCGTTTATT CTACATTTTG CATAATGTTA CCTTATGGAT GTTTGTGGTT
TTGATCGCAT TCCACGCAAG ACCGGGCGTC CCGCTTTTGG CAGTGATCAA CTTGGCATTG
TTAGGCTATC AGATATACCA GAGATTCTTC AAGTCGTATT ATTTACACGA TATCCTGGTA
GTGGAATCTC CCTACTCTAA GATGCAAATC ATAAGGATCC CCAGACCAGA AACCTTCCCT
TCCTACTTAC CAGGCTCTCA CATAAGATTG GGGTACCTGG CGACAAACAT CAGCGCCTGG
CTCTATGCTA CCCACCCCTT CACAATTGCT TCTACAAACG ACGATTCGGA ATCCACGTTG
GACTTGGTCA TGAACAAGCC TGTCAACTTT CCCATTGACA TCACTTCGCC ATACACCATG
ACTGGTCCAT TCCCATCGTT GCCCCCACAG TTTTACACAA CAGCTAGACA CGTGAATATC
ATCTGCGGAG GAAGCGGCAT TTCGTTCGGT TTGCCCATCT ACAAGTACTT TGTAAATTCC
AATAGATCTA TACCTATACG CCTTATCTGG TGTATACGGA GTCTGGATGA TACATTCATT
CTTGACCATT TGCTTCCTGA AAGGTCCATC GATGTACAGA TTTACATCAC CAGTAATACT
GGCAGTTTGA ACCAGCAACA ATCTGCCTCC ACGATCTTTG ACGAAGAGGC AGACGCTTTG
TTGGAAGGTG ATAGTACTAC CAACATAGAG ATGGCTAATT TGGCTACTGA CAAAGAAGAA
AAGAAAACCG ACCATTTCAA CACCATTCAT GATGGTAGAC CAAACTTTGA CGACGCATTC
GGCAATTTAG CTGCTGCTGT TGACGTCGAT GAGAAATGGT TGATTGCTTG TGGTCCTCGT
AAGTTAATCG ATGATTGCCG CAAGTGGACT AAAGGCAAAG ATATTGAATT CTACTCGGAG
TTATATGAAA TGTAGCATAC ATAGATCGGT TATCAAGGCA AAAAATGAAA AT
 
Protein sequence
MSWYSVDSEI ESLERRHAGH HHTVNIKYGY VILALSIVHM VLSISGKKLY FKNWAETGRA 
SSWWRSVVSI PFWVSTLVWL AIFAFLSIFH IEELSENYTT AVKRLGRMAY CLVPFTIFIS
LRPPNTVGYQ SGYYLEKLNL HKWISRLIFA TAIGHGLGFL YKWTKEGALA EKIFKFDNFL
GVTVFALMPV LIFASVNVMR RRNYRLFYIL HNVTLWMFVV LIAFHARPGV PLLAVINLAL
LGYQIYQRFF KSYYLHDISV VESPYSKMQI IRIPRPETFP SYLPGSHIRL GYSATNISAW
LYATHPFTIA STNDDSESTL DLVMNKPVNF PIDITSPYTM TGPFPSLPPQ FYTTARHVNI
ICGGSGISFG LPIYKYFVNS NRSIPIRLIW CIRSSDDTFI LDHLLPERSI DVQIYITSNT
GSLNQQQSAS TIFDEEADAL LEGDSTTNIE MANLATDKEE KKTDHFNTIH DGRPNFDDAF
GNLAAAVDVD EKWLIACGPR KLIDDCRKWT KGKDIEFYSE LYEM