Gene PICST_82366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_82366 
Symbol 
ID4836877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp1292442 
End bp1293223 
Gene Length782 bp 
Protein Length242 aa 
Translation table12 
GC content46% 
IMG OID640388192 
Productpredicted protein 
Protein accessionXP_001383015 
Protein GI126132980 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0092] Ribosomal protein S3 
TIGRFAM ID[TIGR01008] ribosomal protein S3, eukaryotic/archaeal type 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0437402 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATTTCAAACA TGGTTTCTGC TATTTTGTCC AAGAAGAGAA AGCTCGTCGC CGATGGTGTT 
TTCTACGCCG AATTAAACGA ATTCTTCACC AGAGAATTGG CTGAACAAGG TTACGCTGGT
GTTGAAGTCA GAAAGACCCC AACCAAGTTG GAAGTCATTG TCAAGGCTTC TAACACCCAA
GGTGTTTTGG GTGAACAAGG TAGAAGAATC CACGAATTGA CCTCTTTGTT GGTCAAGAGA
TTCAAGCTCT CCCCAGAAGG TATTGTCATC TATGCCGAAA GAGTTGAAGA AAGAGGTTTG
TCTGCCGCTG TCCAAGCCGA AGGTTTGAAG GCCAAGTTGT TGTCTGGTTT GCCAATCAGA
AGAGCTGCTT ACGGTGTCTT GAGATTCGCC ATGGGTGCTG GTGCCAAGGG TGTTGAAGTT
GTCATCTCCG GTAAGTTGAG AGCTGCCAGA GCCAAGTCCC AGAAGTACTC TGACGGTTTC
ATGATCCACT CTGGTCAACC AACCAAGGAC TTCATCGACA TTGCCATCAG ACACGTCTTG
ATGAGACAAG GTGTCTTGGG TATCAAGGTC AAGATCATGA AGGACCCAGC TGCCAACAGA
TTCGGTCCAA AGTCCTTGCC AGATGCTGTC AAGATTTCTG AAGCCAAGGA TGAAGACGAA
GTCATCCCAG CTCCAACTGT CAAGAGCTAC AAGGCTCAAC CAGAAGCTGA AGCTCCAGTT
GCTGAAGCTA CTGCTTAAGA TGTTTGTTTG TAGTTTGATT GTAATATAAA TTAATATCTT
TG
 
Protein sequence
MVSAILSKKR KLVADGVFYA ELNEFFTREL AEQGYAGVEV RKTPTKLEVI VKASNTQGVL 
GEQGRRIHEL TSLLVKRFKL SPEGIVIYAE RVEERGLSAA VQAEGLKAKL LSGLPIRRAA
YGVLRFAMGA GAKGVEVVIS GKLRAARAKS QKYSDGFMIH SGQPTKDFID IAIRHVLMRQ
GVLGIKVKIM KDPAANRFGP KSLPDAVKIS EAKDEDEVIP APTVKSYKAQ PEAEAPVAEA
TA