Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_82366 |
Symbol | |
ID | 4836877 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | - |
Start bp | 1292442 |
End bp | 1293223 |
Gene Length | 782 bp |
Protein Length | 242 aa |
Translation table | 12 |
GC content | 46% |
IMG OID | 640388192 |
Product | predicted protein |
Protein accession | XP_001383015 |
Protein GI | 126132980 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0092] Ribosomal protein S3 |
TIGRFAM ID | [TIGR01008] ribosomal protein S3, eukaryotic/archaeal type |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0437402 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATTTCAAACA TGGTTTCTGC TATTTTGTCC AAGAAGAGAA AGCTCGTCGC CGATGGTGTT TTCTACGCCG AATTAAACGA ATTCTTCACC AGAGAATTGG CTGAACAAGG TTACGCTGGT GTTGAAGTCA GAAAGACCCC AACCAAGTTG GAAGTCATTG TCAAGGCTTC TAACACCCAA GGTGTTTTGG GTGAACAAGG TAGAAGAATC CACGAATTGA CCTCTTTGTT GGTCAAGAGA TTCAAGCTCT CCCCAGAAGG TATTGTCATC TATGCCGAAA GAGTTGAAGA AAGAGGTTTG TCTGCCGCTG TCCAAGCCGA AGGTTTGAAG GCCAAGTTGT TGTCTGGTTT GCCAATCAGA AGAGCTGCTT ACGGTGTCTT GAGATTCGCC ATGGGTGCTG GTGCCAAGGG TGTTGAAGTT GTCATCTCCG GTAAGTTGAG AGCTGCCAGA GCCAAGTCCC AGAAGTACTC TGACGGTTTC ATGATCCACT CTGGTCAACC AACCAAGGAC TTCATCGACA TTGCCATCAG ACACGTCTTG ATGAGACAAG GTGTCTTGGG TATCAAGGTC AAGATCATGA AGGACCCAGC TGCCAACAGA TTCGGTCCAA AGTCCTTGCC AGATGCTGTC AAGATTTCTG AAGCCAAGGA TGAAGACGAA GTCATCCCAG CTCCAACTGT CAAGAGCTAC AAGGCTCAAC CAGAAGCTGA AGCTCCAGTT GCTGAAGCTA CTGCTTAAGA TGTTTGTTTG TAGTTTGATT GTAATATAAA TTAATATCTT TG
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Protein sequence | MVSAILSKKR KLVADGVFYA ELNEFFTREL AEQGYAGVEV RKTPTKLEVI VKASNTQGVL GEQGRRIHEL TSLLVKRFKL SPEGIVIYAE RVEERGLSAA VQAEGLKAKL LSGLPIRRAA YGVLRFAMGA GAKGVEVVIS GKLRAARAKS QKYSDGFMIH SGQPTKDFID IAIRHVLMRQ GVLGIKVKIM KDPAANRFGP KSLPDAVKIS EAKDEDEVIP APTVKSYKAQ PEAEAPVAEA TA
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