| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_82202 |
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| Symbol | |
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| ID | 4837417 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | + |
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| Start bp | 1719235 |
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| End bp | 1722381 |
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| Gene Length | 3147 bp |
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| Protein Length | 997 aa |
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| Translation table | 12 |
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| GC content | 41% |
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| IMG OID | 640388732 |
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| Product | predicted protein |
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| Protein accession | XP_001382552 |
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| Protein GI | 126132054 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00491] translation initiation factor aIF-2/yIF-2 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.236958 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAGA AATCTAAAAA AGGAGCTAAA TCTGGAGGAG ATTTCTGGGA CGATGAAGAA
CTCGACCAGG AAAACACCGG AGCTGAACAC CTTGGTGAAG AACCAACCGA AAATGGCGAT
GCTCCACAAG AGACTTCAGC ACAAGAAGAA CCAGAAGCTG CATCTGCCGA TGACATCGCT
GGTGATTTCT TAAGTTCTAT CCGTAAATCC AAGCAAAAAA AGGACCAAAA GGAAGAGGAA
GACAAGAAGA CCAAAGATGG TCCTAAGATC TTATCCAAGA AGGAAAAGGA AAGATTGAAG
AAGGAAGCTG AAAAACAGTT GAAGAAGGAA CAGGCAGCAA AGAAGAAAGC GCAACAAGCT
ACTAAGAAAG AACAAATCAA GGAAGCTAAC AAGCAAAATG CAGCCGCTGC TAATGCATCC
GCTTCTGCAA CTCCTGAACC AGAAGCTGAA GAAGTCGAAG CCAAGAAGAC CCCAGCTAAG
AAAGGAGGTA AGAAGGCCCC GGCTGGTCTT GCTGCTTTGA GAAAGCGATT AGAGTTGAAA
AAGCAACTTG AAGAGGAGCA GCAGAGATTA GAGGAAGAAG AGGAAGCCAA GAGATTGGAA
GAAGAGAGAT TGGCAGCTGA AGAAGAAGAA AGAAAAGAAG CTGTTAGAGC CGCTAAGAAA
GAAAAGGACA GATTAAAGAA AGAACAATTG AAAGCAGAAG GTAAGTTGTT AACTAAGAAA
CAAAAGGAAG AGAAGAAGTT ACAAGAGCGT CGTCGTCAGC AATTGTTACA AGGTAATGTT
ACTGTTGCTG GTTTACAACA ATCTCCTGAC GGACCTAAAC CAAAGAAGGT TGTCTACACT
AAGAAGAAGT CTACCAAAGC TAAAACTTTC ATTCAAAAGC CTGCTTCTAC TGCCTCTGAA
TCAAAGAAGG TCAATGAGGA GGAAGACGAA GTTCCTGTCG ATGACTGGGA AAAAATGGCT
CTCGATGACG ATGAACCAGT GGCCGATGAT TGGGAAGCTG CTTTGAATGA AGATGTTGAA
GATAAAGCTG ACGTTGAAGA GGATAATGAT GCTGAAGCTG AAGAAGAAGA AGCGGAACGT
AAAGCTAGGG AGGAAGCCGA ACGTAAATCT CAAGAAGAAG CTGCTAGAAA GAAGAAAGAA
GAAGAGGCAA GAGCTGCTGC AGCTGCTGCC GCCGCCGCCG AACAAGCTAA GTTGGCTGCC
CAAAAGACTA TTTCTCCGGA AAAGGATTTG CGTTCTCCTA TTTGTTGTAT TTTGGGTCAC
GTCGATACTG GAAAGACTAA ATTATTGGAC AAAGTTCGTC AAACTAATGT TCAAGGAGGT
GAAGCTGGTG GTATAACCCA ACAAATCGGT GCTACTTACT TTCCAATAGA TGCTCTTAAG
CACAAGACTT CTGTCATGGC TCAATACGAA AAGCAGACTT TCGATGTTCC TGGTTTGTTG
ATTATTGATA CACCGGGACA TGAGTCCTTC ACAAACTTGA GATCTCGTGG TTCTTCCTTA
TGTAATATTG CGATTTTGGT CATTGACATC ATGCATGGTT TGGAACAACA AACTCTTGAA
TCTATAAGAT TATTGAGGGA CAGAAAAGCA CCATTCGTAG TTGCTTTGAA CAAAATTGAT
AGATTGTATG ACTGGAAAGA GATTCCAAAC AACTCGTTTA GAGATTCCTT CGCTAAGCAA
TCGAAGGCGG TTCAAGCAGA ATTTCATAAC AGATACGAAC AGATCAGGCT TGCCTTATCT
GAACAAGGTT TGAACTCAGA ATTGTATTTC CAAAACAAGA ATATTTCAAA GTACGTTTCC
ATTGTTCCAA CTTCAGCTGT CACTGGAGAA GGTGTTCCAG ATTTGTTGTG GTTGTTGCTT
GAGTTGACTC AGAAGAGAAT GTCTAAGCAA TTGATGTACT TAAGTAAGGT TGAAGCTACA
ATTTTGGAAG TCAAGGTTGT TGAAGGTTTC GGTTACACTA TTGATGTTGT GTTGTCAAAC
GGTATTTTGA GGGAGGGTGA TAGAGTTGTA TTGTGTGGTT TGAACGGGCC AATAGCGACA
AATATCAGAG CATTATTAAC TCCTCCACCT GCTCGTGAAT TGCGTGTCAA ATCTGAATAT
GTTCACCACA AGGAGGTCAA GGCTGCTTTG GGTGTCAAGA TTGCTGCTAA TGATTTGGAA
AAGGCTGTTG CTGGTTCCAG ATTGATCGTT GTCGGTGAAG ACGACGATGA AGATGAAATT
ATGGAAGAAG TTATGGATGA CTTAACAGGT TTGTTGGACT CGGTTGATAC ATCTGGTAAG
GGTGTGGTAG TTCAAGCTTC TACATTGGGT TCCTTGGAAG CCTTGTTGGA TTTCCTTAAG
GATATGAAGA TTCCAGTTAT GTCTATTGGT TTGGGTCCAG TCTACAAGAG AGATGTAATG
AAAGCTACAA CCATGCTAGA GAAAGCTCCA GAACTAGCAG TTATGTTGTG TTTCGATGTC
AAGGTTGATA AGGAAGCTGA ACAATATGCT GACGAACAAA ACATTAAGAT TTTCAATGCT
GATATTATCT ACCATTTGTT CGATGCATTT ACTGCTTACC AGGAAAAGCT TCTCGAAATC
CGTCGAAAGG ATTTCATGGA ATATGCTGTC TTGCCATGTG TCTTGAAGAC AATTCAAATT
ATCAACAAGC GTAACCCAAT GATCATTGGT GTTGACGTTG TTGAGGGCGC CGTTCGTATC
GGTACTCCAA TATGTGCTGT TCGTCAAGAT CCTGTTACAA AGCAGCCTAA CATCATGGTT
TTGGGCAAGG TAGTTTCTTT GGAAGTTAAC CACAAATCTC ACGACATTAT TAAGAAGGGC
CAAACTTCTG CTGGTGTTGC CATGAGATTG GACAATCCAT CATCTGCCCA ACCAACCTGG
GGAAGACACG TTGATGAGAC TGATAACTTG TACTCATTAA TCACTCGTAG GTCAATTGAT
ACCTTGAAGG ATCCAGCTTT CCGTGACACT GTCTCCAGAG ATGACTGGCT CTTGATCAAA
AAGTTGAAGC CAGTGTTCGA CATTAAATAA AATCCTAGTT GGTTACTTTA TCTCTTTTCT
CATGTCCACA TTTCATTTTC TACATATAGG CATGCATAGT TACAAAAAAT AATTTATACG
ATAGTAACCT AATTGTATTT TTACTAC
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| Protein sequence | MAKKSKKGAK SGGDFWDDEE LDQENTGAEH LETSAQEEPE AASADDIAGD FLSSIRKSKQ
KKDQKEEEDK KTKDGPKILS KKEKERLKKE AEKQLKKEQA AKKKAQQATK KEQIKEANKQ
NAAAANASAS ATPEPEAEEV EAKKTPAKKG GKKAPAGLAA LRKRLELKKQ LEEEQQRLEE
EEEAKRLEEE RLAAEEEERK EAVRAAKKEK DRLKKEQLKA EGKLLTKKQK EEKKLQERRR
QQLLQGNVTV AGLQQSPDGP KPKKVVYTKK KSTKAKTFIQ KPASTASESK KVNEEEDEVP
VDDWEKMALD DDEPVADDWE AALNEDVEDK ADVEEDNDAE AEEEEAERKA REEAERKSQE
EAARKKKEEE ARAAAAAAAA AEQAKLAAQK TISPEKDLRS PICCILGHVD TGKTKLLDKV
RQTNVQGGEA GGITQQIGAT YFPIDALKHK TSVMAQYEKQ TFDVPGLLII DTPGHESFTN
LRSRGSSLCN IAILVIDIMH GLEQQTLESI RLLRDRKAPF VVALNKIDRL YDWKEIPNNS
FRDSFAKQSK AVQAEFHNRY EQIRLALSEQ GLNSELYFQN KNISKYVSIV PTSAVTGEGV
PDLLWLLLEL TQKRMSKQLM YLSKVEATIL EVKVVEGFGY TIDVVLSNGI LREGDRVVLC
GLNGPIATNI RALLTPPPAR ELRVKSEYVH HKEVKAALGV KIAANDLEKA VAGSRLIVVG
EDDDEDEIME EVMDDLTGLL DSVDTSGKGV VVQASTLGSL EALLDFLKDM KIPVMSIGLG
PVYKRDVMKA TTMLEKAPEL AVMLCFDVKV DKEAEQYADE QNIKIFNADI IYHLFDAFTA
YQEKLLEIRR KDFMEYAVLP CVLKTIQIIN KRNPMIIGVD VVEGAVRIGT PICAVRQDPV
TKQPNIMVLG KVVSLEVNHK SHDIIKKGQT SAGVAMRLDN PSSAQPTWGR HVDETDNLYS
LITRRSIDTL KDPAFRDTVS RDDWLLIKKL KPVFDIK
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