| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_82174 |
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| Symbol | RAC1 |
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| ID | 4836769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | - |
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| Start bp | 759764 |
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| End bp | 761019 |
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| Gene Length | 1256 bp |
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| Protein Length | 226 aa |
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| Translation table | 12 |
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| GC content | 40% |
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| IMG OID | 640388084 |
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| Product | RHO small monomeric GTPase signal transduction |
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| Protein accession | XP_001382914 |
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| Protein GI | 126132778 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1100] GTPase SAR1 and related small G proteins |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.160342 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CTCTTTTGTT GTCAGGCTGT CAAAGGTGTT GTTTTTTTTG AAGCTAATTT TTTTTTGAAT
TGGATTCTTT GTTTTGCTAT CTGGTGGATT TATCTGAGCT TTGAATTTTT CGTCTACCTT
CGTCTTTCTG AGCTCCTTAC TTTTCACAAA TCGTCGTGAA TTCTGTGAAC CTGAACCTGA
TATTAAGTTA TCCCAGTTAT TGCTGTGATT CTAGTTATTG TTTTTTGGCT GGTTATCGTT
ATTGAATAGA CTGACTTGAT ATTCTGTACT GTATTGTCCT CGAATTCTAA GTTTATACCT
ACTTTGCTTT AGCGATTATT CTTCAGCCGT TCATCTTTGC ATCTCGTCAA ATACCATATA
GATAATGAGA AGTATCAAAT CTGTTGTCGT TGGTGATGGT GGTGTTGGTA AGACCTGTTT
GTTGATTTCC TATACCACCA ATACCTTCCC AAATGATTAT ATTCCCACTG TGTTCGACAA
CTACTCGGCC TCAGTGATGA TTGATGGTGA GCCCATCAAG CTTGGTTTGT GGGATACCGC
TGGTCAGGCA GAATACGATA GATTGAGACC CTTGTCGTAT CCACAGACAG AAATCTTCTT
GGTGTGCTTT TCAGTCATAA GTCCCGATTC CTTCCACAAC GTGAAATCCA AATGGATACC
AGAAATATTG CATCACTCGC CTAAGGACAT ATTGATCTTG TTGGTCGGTA CAAAGATCGA
CTTGAGGGAC GATTTGCATG TATTGGATGA ATTGAACGAC AAGAATTTGA AGGCTATCAA
CGTAGAACAG GGTAACAAGT TGGCAAGAGA AGTCGGTGCT ATCACTTACT TGGAATGCTC
GGCTGCCACT CAGGTTGGTG TTAAGGAAAT CTTTGACTAT GCCATCAGAG CAGTTTTGGA
CCCTCCCACC AGAGGCGACT ACGTTGCTGC TTCTTCGCAG GGTCAGGGTT CTGGTCCAAC
CAAATCCAGC AGTGTTGCTC CTGTTAACGC TAGCAAGGGA GGCAATAGAA GAATCAAGAA
AGCTAAGAGA TGCACCATTT TGTAAGCTTC TCATAACAAA CCCTCCCTTG CTTTGAAAGA
CAGCCATTGA TATATATTGT CAATAGATAG TTCATTCTTT CAAACTGTCT TTCTATCTCT
CCCCTCCACT TCTTTAGTTC GGCAAAGACT ATGTATTATC TACCGTTATT TCTATTGTTC
GAACCCTTAA CATACATATT CTTGCTTCAT CGTACAAATA TAATACTTTT ACGTCT
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| Protein sequence | MRSIKSVVVG DGGVGKTCLL ISYTTNTFPN DYIPTVFDNY SASVMIDGEP IKLGLWDTAG
QAEYDRLRPL SYPQTEIFLV CFSVISPDSF HNVKSKWIPE ILHHSPKDIL ILLVGTKIDL
RDDLHVLDEL NDKNLKAINV EQGNKLAREV GAITYLECSA ATQVGVKEIF DYAIRAVLDP
PTRGDYVAAS SQGQGSGPTK SSSVAPVNAS KGGNRRIKKA KRCTIL
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