| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_82046 |
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| Symbol | VTC1 |
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| ID | 4837095 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | - |
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| Start bp | 585839 |
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| End bp | 586675 |
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| Gene Length | 837 bp |
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| Protein Length | 115 aa |
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| Translation table | 12 |
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| GC content | 39% |
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| IMG OID | 640388410 |
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| Product | Vacuolar transporter chaperone 1 (Phosphate metabolism protein 4) (Negative regulator of CDC42 protein 1) |
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| Protein accession | XP_001382873 |
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| Protein GI | 126132696 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG5264] Vacuolar transporter chaperone |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.957136 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | AGAAAAGCTA TTGGTATTTC GAGAGAATCC CCGACACCAT TAGCGGAACA GACAGACAGA
CAATTCTCGG AAATTGTCTC CATCTCATCG AACAATTCTA ACATTTATAT ACAGCTTATC
TTCCAGAACA AATTCAGAAA GTTCACCAGT GAATTTTCAA AAATACAAGT TTCAGTTTCA
GAACAATTGG TTACCATATC AATTGCCGCA GTTATCAAGA CTACCAGACC CGAATTGCTA
AGAATTCAGT AGTTGTCCAT TCAGTCATCT CTCGTTCATC TAGCCTCAAA TTGAATTAAG
AATCTCACTT TCAAACTTCA ATTTCAATAT TTCCATCCGT TTAGTTTCAA TTTCATCCAT
AAAATGTCTG CTACTCAAAA GAGAATTGCT TTACCAGCCA GAGTCGAACC CAAGGTGTTC
TTTGCCAACG AGAGAACTTT CCTCTCGTGG TTGAACTTCA CTGTCATCCT CGGATCTCTT
GGTGTTGGTT TGTTGAACTT TGGTGATGCC GTCGGCCGTA TTTCCGCCGG TCTTTTCACC
TTCATTGCCA TGTTGACCAT GGTATACGCC TTGGTCACTT ACCACTGGAG AGCTAAGGCT
ATCAGATTGA GAGGTTCTGG ACCTTACGAT GACAGATTTG GTCCTACTAT GTTGTGTTTC
TTCTTGTTGG TCGCTGTGGT AATCAACTTT GTGTTGAGAA TCAGAGCTTG ATCTTCATAT
CCATCTTCAT CTTCATTAAT TGTCAATCTT TGTTTAATAG TCATAATGCA CACATAGAAA
CGAATGGCAC GTAAAGTCAA ATATTGTTTT GTATCTACTA CTATATCATT TTCTTCT
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| Protein sequence | MSATQKRIAL PARVEPKVFF ANERTFLSWL NFTVILGSLG VGLLNFGDAV GRISAGLFTF
IAMLTMVYAL VTYHWRAKAI RLRGSGPYDD RFGPTMLCFF LLVAVVINFV LRIRA
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