Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_82035 |
Symbol | PXA2 |
ID | 4837091 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | + |
Start bp | 1760384 |
End bp | 1762841 |
Gene Length | 2458 bp |
Protein Length | 689 aa |
Translation table | 12 |
GC content | 42% |
IMG OID | 640388406 |
Product | Peroxisomal long-chain fatty acid import protein 1 (Peroxisomal ABC transporter 2) |
Protein accession | XP_001382564 |
Protein GI | 150863918 |
COG category | [R] General function prediction only |
COG ID | [COG4178] ABC-type uncharacterized transport system, permease and ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.670256 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTTCCTAAAG CAACGTCCGA TTTTTCCTTT AGTTGAAGTG TTCTTTTTAC TCTCTCACTT CTTCTTCAAG TCTGGACCGA GGAATAGAGA ACAAACAGAT CTCAAATCAT AGATTGTCAA CCGGGTAAGA GTACTCCTCA ACAAATAGCA CAACATACAC TACAGCGTTT GTACTGTTGA TGGAGACGAT ATATATATCC CCAATACCTG TTATTTATAG AGCTGTTTCT GTTTGTGATC TTTTTCACTT TCAATATATC GCTGCCATTT TGTTGACCGT TCACAGTTCA TAGTTCAATC TCCATATCAC AACTGTCTAG TCTAGTATTC ACCATGACAA ACTCAGTCTC CACGTTCAAC CCGGCGCATC CCAACAACTC GCTTGCGTTG TCGCTCTTCA ACGTGTACAA GTCTAATCGG TCGTTGTTTC TCAATTCTTC ATATATCATT CTCATCACTT TGGCCTTTTC TAGGGCTACC AACACGGGCG AGAAAAGAGA CCTAGACATC TCCAAAGATA AGAAGAGAAT TGACGAAAGG GCCTCGTCAC ATCCTAAGTT GTCTAAGGAG TCGTTCTACC GCCTTGCTCG TGCCATCTTT CCCTCAGCGA CAGACCCTAC CATCTTGTAC TTTTTGGGCC ACTCGATTCT TCTAGTCTTC AGAGCTCTTC TCACTATAAA GGTCGCTAGT TTAGATGGTC AGTTGGTAGG AGCGTTAGTG ACGAAGAGAT TGAGAAAGTT TGCCAAATTG CTTATGATTT GGATGGGATT AGGTCTTCCA GCTTCTATCG TCAACGCTCT TTTGACCTGG ACAAAACAGA ATTTGAGTAA GGCAATCAGG GTCAACCTCA ACAACAGCAT AATGGACGAC TACTTGCCAG ACAACTTAGA CGCAAACTAC TACTCGTTGA TCCAGTTGTC AGGTAATAAG ATCAAGGATC CGAACCAAAG AATCACTACC GATATCACCA GATTGAGTTA TGCCTTGAGT AGCTTACCGG GGCAATTGTT GAAACCAACT TTGGACTTAC TCTTGTGTGC ACAGCAGTTA AGTAAAAGCG GTGTAGGTAA CGGCGAGGGT ACATTGGCTC TTGGAATGCT TGCCCATTTC TCTACAATGA TCTTGAGATT CTTCTCCCCG CCTTTCGCCA AATTGGCATC AGAAAGAGCC AATCTTGAAG GTCAGCTACG TTCTTCTCAT TCCAAGATTG TGAGCAACAG CGAGGAAATC GCTTTCTTGA GAGGGCATCA ACGAGAGTTG GATTACATCG ACTATTGCTA CTACACCTTG GAGAGATTCC TGAAGAACGA GATTTGGAAA AAGGCAATTC ATGAAATTGC GCAAACTTTC ATTGTCAAGT ACTTCTGGGG TGCAGCTGGT TTGGTGTTGT GTTCAGCTCC AATTTTTATC AACAAGTATC TTGGCGAAGA CCCAGATGCC GACCATGCTG GTGACTTCAT CACTAATAGA AGATTGTTGA TGAGTGCCTC TGACTCGTTG GATAGATTGA TTTACTCAAG AAGATACTTG CTTCAAATCC TTGGTCATGC CACCAGAGTT TCCGACTTAC AAGACACTTT GTTCGAGTTG AAGAACAAGA AGAAATCGAC AAAAAATATC GAAATGAACA ACGAAGAAAT TACCTTCAAA GACGTCAGAT TGTTGACTCC AGCAGATGTT ACCTTGATCG AGTGCTTGAA CTTTTCAATA AAGAGAGGTG ACCATCTTTT GATTGCTGGT CCAAACGGTT CTGGTAAATC TTCTCTATTC AGAATGTTAG GTGGTTTATG GCCATGCAAG GAAGGAAGTA TAACCATTCC TAACACAGAG AATATGTTCT ACTTGCCACA GAGAGCTTAC TTGTGTCAAG GTTCATTAAG AGAACAAATA ATATATCCTC ACAACTTGAA ACAGTTTAGA GCCAGCCAAA AAACCGACCA GGATTTGAAG GATATCTTGA CTCTCTTAAA GTTAGATGAT CATTCAGACC GTTTGGATGA TACCACCAAT TGGAGTGAAG AGTTGTCTAC CGGAGCCCAG CAAAGACTTG CCATGGCCAG ATTGTACTAC CACAAGCCTA GATTCGCAGT TTTGGACGAA TGTACTTCAG CCGTATCTCC TGATATGGAG CAATTCATGT ACAAACATGC CCAAGAACTC GATATCACGG TGTTGTCTGT TGCTCATAGA CCCGCTTTGT GGCATTTCCA CAAATATTTA TTGAAGTTCG ATGGAAAAGG TGGGTACTAC TTTGGAAAGC TAGATGCTGA AAAGAGATTG CAGTTCGAAC ATGAAAGAAT TTTGCTCGAC AAATCTTTAA GAGATGTACC AAACTTGAGA GAAAGATTAT TTGAATTGAA AAAGGTGTCT ACGGCTCAAC ATAAGAAGAT TGACCATATA TAGCCTTACA AAGTGAATAT GCTAGTGCGA GTTACCTAAT ATAATGGAGA TAGCTAAA
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Protein sequence | MTNSVSTFNP AHPNNSLALS LFNVYKSNRS LFLNSSYIIL ITLAFSRATN TGEKRDLDIS KDKKRIDERA SSHPKLSKES FYRLARAIFP SATDPTILYF LGHSILLVFR ALLTIKVASL DGQLVGALVT KRLRKFAKLL MIWMGLGLPA SIVNALLTWT KQNLSKAIRV NLNNSIMDDY LPDNLDANYY SLIQLSGNKI KDPNQRITTD ITRLSYALSS LPGQLLKPTL DLLLCAQQLS KSGVGNGEGT LALGMLAHFS TMILRFFSPP FAKLASERAN LEGQLRSSHS KIVSNSEEIA FLRGHQRELD YIDYCYYTLE RFSKNEIWKK AIHEIAQTFI VKYFWGAAGL VLCSAPIFIN KYLGEDPDAD HAGDFITNRR LLMSASDSLD RLIYSRRYLL QILGHATRVS DLQDTLFELK NKKKSTKNIE MNNEEITFKD VRLLTPADVT LIECLNFSIK RGDHLLIAGP NGSGKSSLFR MLGGLWPCKE GSITIPNTEN MFYLPQRAYL CQGSLREQII YPHNLKQFRA SQKTDQDLKD ILTLLKLDDH SDRLDDTTNW SEELSTGAQQ RLAMARLYYH KPRFAVLDEC TSAVSPDMEQ FMYKHAQELD ITVLSVAHRP ALWHFHKYLL KFDGKGGYYF GKLDAEKRLQ FEHERILLDK SLRDVPNLRE RLFELKKVST AQHKKIDHI
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