Gene PICST_81978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_81978 
SymbolATP5 
ID4836651 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp656084 
End bp656904 
Gene Length821 bp 
Protein Length205 aa 
Translation table12 
GC content45% 
IMG OID640387966 
ProductF1F0-ATPase subunit 
Protein accessionXP_001382366 
Protein GI126131682 
COG category[C] Energy production and conversion 
COG ID[COG0712] F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) 
TIGRFAM ID[TIGR01145] ATP synthase, F1 delta subunit 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.581266 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.944639 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
AAAGCACTTC ACAATGTCCT CCCGTGTCTT CTTCCGTTCG TTGGCCTCAT CTGCCAAGTC 
TGTCAAGCCC CCAGTGCAAT TGTATGGTAT TGACGGTACT TATGCCAATG CCTTGTACTC
TGCCTCGGTC CAGGACTCTT CTGTAGAAGC TTCTTTCCAG TCCTTGACCA AGATCAACAA
CTTGATCCAG AGCGACTCAA AGGTAGCTGA GTTTTTGGCC AACCCAGCCG TCAACAAGGC
TGACCGTGAC TCTGTCGTCA AGGTCATTGA GTCTACGTTG AAGTTGGACA AGACCACCGG
TAACTTCTTG TCGGTTTTGG CCCAGAACAA CAGATTGACC ATCTTCAAGT CCATCTACGA
AAAGTTCTCG TTGTTAAACG ATGCCCACAA TGGTCTTGTT GAAGCCAAGG TAACCTCTGC
TAAGCCTTTG GACTCCAAGA TCTTGAAGAG ATTGCAAACC TCTATCAGTA AATCCGCTTT
GGTTGGTGAA GGTAAGACCT TGAAGCTTAC CAACAACGTC AACCCAGAAA TCTTGGGTGG
TTTGGTTGTC GAAGTTGGTG AACAAACCGT CGACTTGTCT GTCCAGTCCA AGGTCTCCAA
GTTGAACCAG ACCTTGAAGG AAGCTTTGTA AGCTCTTCAA GCTCACATCA TAAAAGAACC
ATCCCATCAT CCTGTTGTAA CGAAAAGGTA ATACCAAATC CTACAGTGCT ATTTCGCTTT
GATAGGGCTC TTCCAGTTTA CGACATCATA TGTAGCACAT TGACTAGATA TTCGTTTCTT
CTTCATCCGT TCAGTTAAGT TATTATATAT AAAGAAGTTA G
 
Protein sequence
MSSRVFFRSL ASSAKSVKPP VQLYGIDGTY ANALYSASVQ DSSVEASFQS LTKINNLIQS 
DSKVAEFLAN PAVNKADRDS VVKVIESTLK LDKTTGNFLS VLAQNNRLTI FKSIYEKFSL
LNDAHNGLVE AKVTSAKPLD SKILKRLQTS ISKSALVGEG KTLKLTNNVN PEILGGLVVE
VGEQTVDLSV QSKVSKLNQT LKEAL