Gene PICST_81861 details

Gene Information

• Locus tag: PICST_81861
• Symbol: FST3
• ID: 4837202
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Scheffersomyces stipitis CBS 6054
• Kingdom: Eukaryota
• Replicon accession: NC_009042
• Strand: -
• Start bp: 1899935
• End bp: 1903547
• Gene Length: 3613 bp
• Protein Length: 1095 aa
• Translation table: 12
• GC content: 40%
• IMG OID: 640388517
• Product: Fungal transcriptional regulatory protein
• Protein accession: XP_001383136
• Protein GI: 150864358

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.518071
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 16
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGACGAGC ATACAATCAG AAAGAGAAAC AGACCAAGTT TGGTCTGTAA ACCATGCAAG 
AAGAGAAAGA TCAAGTGTGA CAAAGGAAAG CCATGTACGT CTTGTGTCAA AAACAAGATG 
GACCATCTTT GTGTCTATGA CGAAAAATGG ATTGGCAGCA AGAAATCCAA AAGATCAAAA 
ACTACTGTTG CCAAAGTGCT ACCATTGGCT TCTTCTGTTC CAGGTGTAAA TGCTATTACC 
AATAACGGAA TATCCATCCA CACTGGAGTC ATTAGCCCCA CCAGTATAAA ACACGAGCTC 
CTCTCAGATT CAGGCGAGAA ACCTCTCCAA CAGACTAAGG ACCCGAATAA GGAAAAATCT 
GTAGTTGTGA TAGTGCCGAA GTCAGAACTT GACGAACTAC GGGCAAAAGT CCAGAGGTAT 
GAGCATGGTA TGATATCTCC TTCGAGATCT GATAACTCGG AGGAACAGAA CAGTACTCTG 
TCATCGACAA GTTCGAGCTA TCGCAACATA AACAAAGTCT ACCCTCCTCC AGAAGTTAGT 
ATCCATTTCT ATAACCGATC CATAAATCCT ACCAAGCGTT CATTGTATGC ATATCATGAT 
CCAGATAGAC CTGGAGAGAT CCCCGTTGAC GATCTTTTTG TGAACAACCA GTGTTTTATC 
ACCAGAGATA TGCCACCGCC TAAAGCCAAG CGTATGACGT TGGATGACGT GCCCAAACAC 
GATTACTACG CAGTAGGTAT CAACCCGTAC GAATCACCTA CAGACACTAT TAACTTCTAC 
GAAAACTATA ACCCTGTACA AGTGAAGGAC TGTTCCAAAC GTATAAGCTT TGGACCTCTT 
GCATGGGCTA CGATTCTGAA GAAGGACAGA ACTCTCTCGC TTATCAAGAA ATTCACGTCA 
TCACAGAAAG CCCAGTCGGT TTTGGAAAGG ATCAATAGGT CCAGAACTGC TACGGCAGAA 
CCCAACGCTG TCTTAGTCGG CTGTATGGTA GAACCACCAC AAGAAGAACT CAAGTCCACA 
TTGAATGTAG ATGGCAGCCA AATCAAACAT TTTGAGCAGA AAGTATTGGA AGAGGAAGGT 
TACAATGACG TTAAGCCATA TAACGAAACG AAGACAAGTA GCAAGAAGCA AAGTGCAAAA 
AAAGAAGTAT CACACAACGT GTTCCGTGAC ATGGACAAGA AGTCTCTCAT GTTGGGGCTT 
ACTATTTTGG AGAAGCTGAT CGATAGAGAG TTGAAACTTA TCGAACAGAT TCAAGTATCT 
CTTCCCAAAC AGAGAGTCAT TTGGCTCTTG ATAGACCGTT TCTTTAAAGT AGTATACCCA 
TTTGTACCAT ATCTCGATGA AGAGGACTTT AGATACCAAG TTGCTAGAAT TATTGGTCCT 
GAAGGTTACG AAGAAACTAA GGTCGAAGTC AATGTAGAAA AAAGATTAGA CTTGTCGTAC 
TTGGGAGTGT TACTAGTTGT GGGAAGATTA TCCTATTTGT CGCTTTTTTC CAATCGTGTT 
TCGATAAATG AAAAGATCTT ACGTAGCAAA GATCTCACCC ATGAACAGGA AGTAATAAAG 
TATTTATTGA TGAATGCCGT CAATATTGGT GCCATTGATT TGGCTCGTGA ATGCCTTCAC 
CAGTTTGATT TGTTAAGAAA GTTGAGCTTC CCAGTATTGC AATGTGCTCT TTATATCAGA 
TTGTACAATC TGCTTGCACC AGAAGACGGC GATGGTTTGG ATGGTGGCGA TGGTCAAGTG 
TTTAACGGAA TGTTGGTTCA GATGTGCTAC TCTATTGGCT TGAACAGAGA GCCTGACAAT 
TACAGAGAAA CATTCACAGA CGAGAAAACA AATAACTTGG GAAGAAAGAT CTGGTACTAT 
GTTGTAGTCA ATGATTATAT TCAAGCGTAT ACTTTCGGCA ATCCCTTGAC TACTAATTCG 
ACGTACTACG ACACCAAAAT GCCATTCATC ACGAGTGATA ATACCAATCT CAGAGACGTA 
GAGCTTGATA AATCTATTGT GAGTTGCTAC ATGTTTGATG AAGCACTTCT CAGGGGGCCA 
ATACGTGAAA TCCTCAACCA AATTTTAAAC ATCAACGTGC GAGTGAAGGT CCCCCCATTT 
ACCCAGTATG TTAACCATTT GGAACTTGGT ACGATTAGTA TCTTTGGCAG AATTCGTGAT 
TATTCACACC GTTTAGAGTC TGAGGATGTT TCTTATCGTT TTAACAAGAT AAGAAAGGCA 
TATTCCCTTA TCTCATTCAA TGCTTTTTTC GTATCGGTAT ACTACTATTT CTATGATTAC 
TATGAAAGCA GGGGAAACCA GGTGTTATCA GTATTTTATT TGAAGAAGTT GTTGGCAATC 
ACTGTAGGGG AAATGATACC GTACTTCTTC CCTCTTATCA TCAGATCTGC TGAGATCTTT 
GGTGATGGTT CAGATTTGAT GATCAACCCT CCTATCATTC AGGGAATACA ACGTACAAGT 
GATCTGGTAA TGATTATCAT GGTTAAACTC AATTTTTGGC TTATTAATAC TGTCAATAAT 
CCTCAGCATA ATTTCATGAT GAAGAATGAT GCCAAATACA GAAACTACTT CGAATTGGTG 
TCTACTTTGG TTGTTTGTTT GGAGAAATGT GCTAAGATTT GTCTCATGGC CTCATCAATA 
ATGAGTAGCA GATACTACTA TGCCTGGGGG ATCTACAAGA GCCACAATTT CTTATTCAAA 
GTTATCAGCG ATCGGGAATT CTATACTCAG AACCTAGACT TTGAACTGCA CTACATACCT 
CCTACCAAAG ATCAACTTCA GGACATAACC AACTTGGTAC AGAACTCATT AAATATCTTG 
AACCGCACTG TTGGTGAGCA TTGCGACAAA GTGGATCTTA GGACCTTGTT CAAGGTGTAT 
GGTCAAGTTC CTAGTGTGTT GAAAGACTTG GAAACGGCTA ATCCAGAAAG TATGAACAAG 
CCTACTTCTT TCAATATGCC TATCGGCGAC TTTCCTGGTC TTTCTAGTCC GGACACACCA 
TTGTCAGACA CATCCAGTGC ACAGGGTGTT CTACTTGGTA GCTTTGACGA CTTAAAGTAT 
GACGGTAGTG CTGAAATTGA CTCGTTGTGG TTGCAAATGC TTTCACAAAA GACTAACAAA 
CAGAATACTT TTGAAGAGGC ATTCAATCTC GTCGACAATA ATGTAGCTAA TTCTAACAAT 
ATTCCCTCCG GATCTGATAG TTCTACTTTC ACTGGTAGTA CTGCGAATAC TGGAGTCTCT 
GGAAGTGGAA GTTCTGCTGC AACTTCTACG CCGGCCAATG GACAGCAGCC TTCTACAGAT 
TACAATTTCA CTCTGACAAA CTATCAGCTC TTTGAGAGTT TAGGGTCTGT ATTCGATGGA 
GGAGCAAACG GTCACTTTGA TTTCTTCAAC GACTTGCCAT TGGATAAGGT GTTCAACTAG 
TTGAAGTTAA GACGTATCCA CAAAAAGTAC TAACATCACT ATTTTAATCT TTTCTACGAG 
TCTGGTTTTC TCATTTTTTC AACCATCTTT TATAACTTTT CTTCGACTGG TCTAATCTAT 
TGTCATTGTG GTGTCGTGTG TTTCTTTTCA TTCTTATCTT GTATTTAATT TATTGGAGGT 
TAATCAAAGT TAG 

 

Protein sequence

MDEHTIRKRN RPSLVCKPCK KRKIKCDKGK PCTSCVKNKM DHLCVYDEKW IGSKKSKRSK 
TTVAKVLPLA SSVPGVNAIT NNGISIHTGT KDPNKEKSVV VIVPKSELDE LRAKVQRYEH 
GMISPSRSDN SEEQNSTSSS TISIHFYNRS INPTKRSLYA YHDPDRPGEI PVDDLFVNNQ 
CFITRDMPPP KAKRMTLDDV PKHDYYAVGI NPYESPTDTI NFYENYNPVQ VKDCSKRISF 
GPLAWATISK KDRTLSLIKK FTSSQKAQSV LERINRSRTA TAEPNAVLVG CMVEPPQEEL 
KSTLNVDGSQ IKHFEQKVLE EEGYNDVKPY NETKTSSKKQ SAKKEVSHNK SLMLGLTILE 
KSIDRELKLI EQIQVSLPKQ RVIWLLIDRF FKVVYPFVPY LDEEDFRYQV ARIIGPEGYE 
ETKVEVNVEK RLDLSYLGVL LVVGRLSYLS LFSNRVSINE KILRSKDLTH EQEVIKYLLM 
NAVNIGAIDL ARECLHQFDL LRKLSFPVLQ CALYIRLYNS LAPEDGDGLD GGDGQVFNGM 
LVQMCYSIGL NREPDNYRET FTDEKTNNLG RKIWYYVVVN DYIQAYTFGN PLTTNSTYYD 
TKMPFITSDN TNLRDVELDK SIVSCYMFDE ALLRGPIREI LNQILNINVR VKVPPFTQYV 
NHLELGTISI FGRIRDYSHR LESEDVSYRF NKIRKAYSLI SFNAFFVSVY YYFYDYYESR 
GNQVLSVFYL KKLLAITVGE MIPYFFPLII RSAEIFGDGS DLMINPPIIQ GIQRTSDSVM 
IIMVKLNFWL INTVNNPQHN FMMKNDAKYR NYFELVSTLV VCLEKCAKIC LMASSIMSSR 
YYYAWGIYKS HNFLFKVISD REFYTQNLDF ESHYIPPTKD QLQDITNLVQ NSLNILNRTV 
GEHCDKVDLR TLFKVYGQVP SVLKDLETAN PESMNKPTSF NMPIGDFPGL SSPDTPLSDT 
SSAQGVLLGS FDDLKYDGSA EIDSLWLQML SQKTNKQNTF EEAFNLVDNN VANSNNIPSG 
SDSSTFTGST ANTGVSGSGS SAATSTPANG QQPSTDYNFT STNYQLFESL GSVFDGGANG 
HFDFFNDLPL DKVFN