| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_81825 |
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| Symbol | RPL42A |
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| ID | 4836679 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | - |
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| Start bp | 2342446 |
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| End bp | 2343440 |
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| Gene Length | 995 bp |
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| Protein Length | 106 aa |
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| Translation table | 12 |
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| GC content | 35% |
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| IMG OID | 640387994 |
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| Product | 60S ribosomal protein L44 |
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| Protein accession | XP_001383203 |
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| Protein GI | 126133356 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1631] Ribosomal protein L44E |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0270897 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.128685 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | AATCAAGTCA CAATGGGTAT GTGTTAGACA CCAACAATGA AGAGGAAATC CATAGCATTA
GGCAGAATCA TCAAATCATG TATAATATAG AGAACCCACT AGAAGAATCT GTTCATTAAT
GATAATGTTC GAGATGATAA TTGTCAAATT CGATATCAAA GTTTTCAGAG AATTTTCAAA
AGCATCGAAC ATTTAAGAAG ATAAAAAGTT GAGGGACGAA GATGGAAGCA ATGTAGAAGA
AATCAGAAGT CATTTACAAA TCGTCCATAA GTTATCTAGA AGTCATCGAA GACAGTGAAG
ACTATCAATT TTGAAGTAAA GGAAAATATT GTGACAGCAT GCAAAATCCA CGACGAGAAC
TGAAACACCT TAAAACGATC ATTCTGTCTT TCGCCAAAGA CTAACCTCAT TCAGATTACC
GACATTCATA ATACTAACCA GATATTTAGT TAACGTCCCA AAAACTAGAA AGACCTACTG
TAAAGGTAAG GAGTGCAGAA AGCACACTCA ACACAAGGTT ACCCAATACA AGGCCGGTAA
GGCTTCTTTA TTCGCTCAAG GTAAGAGAAG ATATGACCGT AAGCAATCTG GTTACGGTGG
TCAAACCAAG CAAATTTTCC ACAAGAAGGC TAAGACTACC AAGAAGGTTG TCTTGAAGTT
GGAATGTGTT GTCTGCAAGG CCAAGTCCCA ATTGCCATTG AAGAGATGTA AGCACTTCGA
ATTGGGTGGT GACAAGAAGC AAAAGGGTCA AGCTTTGCAA TTCTAAAAGT GATAATCAAA
GAATTGTTAA TGAATTTGAA TATGATAAAA AGTCATTATT GGTGAGCAAT TGCTTCATGG
AATGGTGTTG CATACACATT AATACACTAA TGACGTTTGT AATATAAATA TATTATTGTT
CATTCCCATT TTGTGAAGAG CCGTCGATAG TCCATTTTTA TTGAGGTTTA TACTTTTTGG
TTTATCATTT ATACTATAGT AAAAATAGCT TTTAG
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| Protein sequence | MVNVPKTRKT YCKGKECRKH TQHKVTQYKA GKASLFAQGK RRYDRKQSGY GGQTKQIFHK
KAKTTKKVVL KLECVVCKAK SQLPLKRCKH FELGGDKKQK GQALQF
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