| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_81790 |
|---|
| Symbol | |
|---|
| ID | 4836980 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009042 |
|---|
| Strand | - |
|---|
| Start bp | 1125155 |
|---|
| End bp | 1126304 |
|---|
| Gene Length | 1150 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640388295 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001382995 |
|---|
| Protein GI | 150864253 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0639] Diadenosine tetraphosphatase and related serine/threonine protein phosphatases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.637046 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTAG ACACAGACGT GCCTATGGAG GATGTCGAAG ACTTGAAACA AGCCGAAACC
GGCTCTGGCC CGGACGCTTC CCCCCACAAC AACAGTAGCA ACAGTAATCG CAACAGTAAT
AGTAACACCA CAGCCAAGAA GTCTGACTTG AATCCGTCCA CTGTGGGCCA GTTGGACGAG
TGGATCGACA AGTTGTCTAA ATGCGAGCCT TTGTCGGAAA CAGATGTCAA GAAGTTGTGC
GATATGGCCA TTGACGTTTT GCAATTTGAA GAAAACGTCC AGCCTGTGCA AGTGCCTGTG
ACCATCTGTG GTGATGTCCA TGGCCAGTTC CACGACTTGA TCGAATTGTT CAAGATTGGA
GGACCCTGTC CCGACACGAA CTACTTGTTT ATGGGTGATT ATGTAGACAG AGGCTACTAC
TCGGTGGAAA CTGTGTCGTA TTTGGTTTGT ATGAAGGTCA GATACCCCAA CAGAATCACC
ATCTTGAGAG GAAACCACGA GCTGAGACAA ATTACACAAG TGTATGGTTT CTACGATGAA
TGTTTGAGAA AATATGGCTC GGCTACAGTG TGGAAGTTAT TCACCGACTT GTTCGACTAC
TTCCCCATCA CCGCCTTGGT AGACAACAAG GTGTTCTGTT TGCACGGAGG TTTGTCGCCG
ATGATCGAAA CGATTGACCA GGTCAGAGAG TTGAACCGTA TCCAGGAAGT GCCACACGAA
GGACCTATGT GTGACTTGTT ATGGTCAGAC CCCGACGACC GTGGTGGATG GGGGATTTCT
CCCAGAGGTG CCGGTTTCAC GTTTGGACAA GATATCTCCG AGCAGTTCAA CCACACCAAC
GACTTGAGTC TCATTGCGAG AGCGCACCAG TTGGTGATGG AAGGCTTCAG CTGGTCGCAT
CAGGAGTCGG TGGTGACCAT CTTCTCAGCA CCAAACTACT GCTATAGATG TGGGAACCAA
GCAGCCATCA TGGAGGTGGA CGAACAACAT AATAGACAAT TCCTACAATA CGATCCTTCT
GTTAGACCTG GCGAGCCAAC TGTGACCAGA AAGACGCCCG ACTACTTTTT ATGAGCCTAA
TGTTGTTTAC TGTTTTGTTT TGTTATAGTA GTGATTTTGT AATCTACTAT GAATGTTCTA
ATATATAAAG
|
|---|
| Protein sequence | MELDTDVPME DVEDLKQAET GSGPDASPHN NTKKSDLNPS TVGQLDEWID KLSKCEPLSE
TDVKKLCDMA IDVLQFEENV QPVQVPVTIC GDVHGQFHDL IELFKIGGPC PDTNYLFMGD
YVDRGYYSVE TVSYLVCMKV RYPNRITILR GNHESRQITQ VYGFYDECLR KYGSATVWKL
FTDLFDYFPI TALVDNKVFC LHGGLSPMIE TIDQVRELNR IQEVPHEGPM CDLLWSDPDD
RGGWGISPRG AGFTFGQDIS EQFNHTNDLS LIARAHQLVM EGFSWSHQES VVTIFSAPNY
CYRCGNQAAI MEVDEQHNRQ FLQYDPSVRP GEPTVTRKTP DYFL
|
|---|
| |