Gene PICST_81624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_81624 
SymbolSUI3 
ID4836994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp1476709 
End bp1477646 
Gene Length938 bp 
Protein Length271 aa 
Translation table12 
GC content43% 
IMG OID640388309 
ProducteIF2 
Protein accessionXP_001383055 
Protein GI150864298 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1601] Translation initiation factor 2, beta subunit (eIF-2beta)/eIF-5 N-terminal domain 
TIGRFAM ID[TIGR00311] translation initiation factor aIF-2, beta subunit, putative 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.571106 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ACATAAGACA CTAATAGCCC CAGCCATGAG TGATTTGGGA TTTGATCCAA GTTTGAAAAA 
GAAGAAGAAG GTCAAGAAGG CCGAAGATGG CTCCGAGTCG CCAGCTCCAG AAGTGGTGGA
CGAGATGTTT GCCAACTTGA AAAAGAAGAA GAAGTCCACA AAGAAAGCAG AAGAAGACTT
CGAAAAATCA GCACTGCCTG TCGGGGACGA CTTGTCGTCT TCGTTGGGTG ACCTCACACT
CAAGAAGAAG AAAAAGAAGG CCGTCAAGAC TGTTGATACT TCTGAATTTG AGCAGCAGTT
GGAAGAAGCT GGTGTAGAAG AGCCTGCCTC TGAAGCTGTC ACATCTGATG GCCAGGACAT
TGGTTTCAGC TACGAGCAGT TGTTGTCTCG TTTCTTCGAC ATTTTAAAGA CGAATAACCC
TGAGTTGGCC GGCGACAGAT CCGGACCCAA GTTCAGAATT CCTCCTCCTG TATGTCAGAG
AGAAGGTTCC AAGAAGACGT TGTTTGCCAA TGTTCAAGAA ATAGCCACAG TATTACAGAG
AAATCCTGAG CACTTGATAC AGTTCTTGTT TGCCGAATTA GGTACATCAG GTTCCATTGA
TGGTGAGAAA AGATTGGTGT TAAAGGGGAA GTTTCAGCCT AAGCAGATGG AGTCTGTGTT
GAGAAGATAC ATTATCGAAT ATGTCACTTG TAAGACCTGT AAGTCCATGA ACACTGAGTT
GAAGAGAGAG TCCGCTAATA GATTGCATTT CTTGAGCTGT AAAGCCTGTG GATCCACCAG
ATCTGTTTCG TCCATTAAGA CCGGTTTCCA AGCCCAAATC GGAAGAAGAA AAAGAGCATA
GCCCAGTGCA TCGTATATAT ATAACAAGTA CTTTCCGATT ATCTGTAGAG TATTTACAAT
GTATAATAAA TAAGTCTAGA AATATCATAT CATCATAT
 
Protein sequence
MSDLGFDPSL KKKKKVKKAE DGSESPAPEV VDEMFANLKK KKKSTKKAEE DFEKSASPVG 
DDLSSSLGDL TLKKKKKKAV KTVDTSEFEQ QLEEAGVEEP ASEAVTSDGQ DIGFSYEQLL
SRFFDILKTN NPELAGDRSG PKFRIPPPVC QREGSKKTLF ANVQEIATVL QRNPEHLIQF
LFAELGTSGS IDGEKRLVLK GKFQPKQMES VLRRYIIEYV TCKTCKSMNT ELKRESANRL
HFLSCKACGS TRSVSSIKTG FQAQIGRRKR A