| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_81508 |
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| Symbol | SMP2 |
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| ID | 4836687 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | + |
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| Start bp | 362840 |
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| End bp | 365678 |
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| Gene Length | 2839 bp |
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| Protein Length | 768 aa |
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| Translation table | 12 |
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| GC content | 45% |
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| IMG OID | 640388002 |
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| Product | protein involved in plasmid maintenance, respiration and cell proliferation (by homology) |
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| Protein accession | XP_001382302 |
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| Protein GI | 150863734 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5083] Uncharacterized protein involved in plasmid maintenance |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATACG TCGGCAAAGT TGGAGGATAC GTCTACAACC AGTGGAATTC GCTCAATCCT
CTGACGCTTT CCGGTGCGAT TGACATCATT GTAGTAGAAC AGCCGGACGG GACGCTCCAC
TGTTCGCCGT GGCATGTTAG GTTTGGGAAG TTCCAAATCA TCAAGCCGCT GCAGAAAAAG
ATCGATTTGT ATGTCAATGA CGTGAAGACG GATTTGCCCA TGAAGTTGGG TGATGGTGGA
GAAGGATTTT TTGTGTTTGA AACCGACAGC CGTGATGGGT TATCCCAGAG CGTGTTGACA
TCTCCGGTTA TATCGCCAGT TTCTTCGGCA TCCACGTCTC CAATTGGTTC TCCACAACTG
TCTGGTATCG GAGAAGATGA TATTGGGCGG GCAGAGCCGG AATTACTCGA TTTAAACGCG
AACTCCGTCG ATATTGAAGA CAAGATCAAA CTTTCCGATG AGCCTTCGCC AGTACTTGCT
GGGTCTTCAC CGAAAGCTGC AACTCCGACA CCATCGTTGC AGTCCAAGAC GTTTGAAAAA
GTGAGGAAAA TCACCCAAAA GTTGAACATA CCCTCAAAGA TCGACATCAA CGGCGATATC
GTTTTGGACA TGGACGGTTA TAAGCCCAAC GCCCAGAAGA ACATCGACAA CTCCGACGAG
TTGTTCAAGA AGATATTTTT ACAGGAGATA AAGGATTCGT CGGCTGTACA CGGGAGCAAC
ACCAATAGCG CCAGTAACAG CCATAGTAAC AGTAGTGCTA ATGTCCTCGG AGAGGGAGAG
GAGGAGCTTT CTTCCCTCTG GGAACAGTTC GTCAGTAAAG ACAAAAATGG CAATATTCGT
ATTTTGAATA GAGATCACTT ATCACCGATG GAAGACGATT TGATGTCGGT CGAAGGCTTG
GTTAGTGAGA ACGAAGATGA CGCCCAGTCG TTGAGAACCT CTGCCTCTGT TATAACCTCC
AATACTGGTA GCAACACAGG AGATGGATCT CTTCCCAGTT CCAGTAGTGA GTCAAGTAAA
ACATACTTCA AAACTCTTCG GTTGACTTCT GAACAGATGC AGAAAATGAA GTTGCATTAT
GGTGAAAACA AGTTGACGTT CAAACTCAGC GAAGGTACGG CTCAGATTGA GTCTTATTTG
TATCTCTGGA GGGCCACTAC ACCAATAGTA ATCTCGGATA TCGATGGAAC CATCACCAAG
TCCGATGCCT TGGGCCATGT GCTTAACTTG TTCGGTAAGG ATTGGACCCA TCCTGGTGTA
GCTACTCTTT TCACCGACAT CAAAGCCAAC GGGTACAACA TTATATATCT TACCGCAAGG
TCGGTAGGCC AAGCCGATAC TACCAGACAA TATTTACGTG GCATTGTACA AGACAATGGC
GTGAAATTGC CTCAGGGACC GGTCATTCTT TCTCCCGATC GAACCATGGC CGCCTTGCGT
CGAGAAGTCA TCTTGAAGAA GCCAGAAGTG TTTAAGATGG CGTGTTTGAA CGATATCAAA
AGTCTCTATT TCCACAGTGA TCAGTTCGCA GAGCCAGAAG ATGACGAGAG AACGCCTTTC
TACGCGGGTT TCGGCAACAG AATCACCGAC GCTATAAGCT ACAGATCGGT GAAGATTCCC
AGTCACAGAA TATTCACTAT CAATCCCAAT GGAGAAGTCC ATATGGAATT GTTGGAGTTG
GCCGGTTACA AGTCGTCGTA TTTACATATC GGAGAGTTGG TCGACCAATT TTTCCCTCCA
ATCAAACAGG TTTCGTCCCT GGACTCGTAT TGGAATGACA ACCAGTTGCA CGAATACATG
AGCAACTTGA ACCATTCCGA TACGAACGAT GTTTCTTGCG GTGCTGGTTC TCCCAGACTG
CCTGGTTCAC CTCGAAGCCT CAACGAGGAA GGCTTCAGAG ACTTCCAAAC TGAAGAGAAG
TTCAACGACG TCAACTATTG GCGAGAGCCA CTTAGTTTCA GCGATTTGAG CGATCTTGAT
GATGAAGAAA CAGCAACACC AGAACCTCCT AAATCGCCAG GTCTATTGCT GTTGCGCTCA
TTCACTTCTG ACTCTGAAAA TATATACGAT GAGAAGAAAG CTGCTACAAA TCCAGAACTT
AATGAAACCC GTACTCGTTC CAGGGCTTCC TCAAGTCCAC CAGAACGCCC TACTTCAGTC
TCGTCATTTA CTTCCCCGTT GAAGAATTTC ATGATGTTCG GAAGCAAAGG CAACGACATC
GACGACGATG ACGACTACAC TGAAGTCAAA GACAATAATA GCCCCAGAAA GTCACAACTC
ATCTCCAAAC TAGCCAATGC ACGTGACGAC TCTTTGCTAG ACGATGGAGT TCATGATTCA
GACTACACTG CTGAAGAGGA TCTCGATGAC GATGACGATT ACACTGACGA CGATTACGAT
GAAGATGAAG ATGATGACTA TGAAGATGAC GACGATTACG ATGAAGAAGA AGAAGAGGAA
GACTACGATG AGGAAGAAGA CTTCGATGAG GAGGACATAG ATGATGATGA CATCGATGAA
GATGACGGGC TACCAGAAGA AGTTCAACAG AAGTTGTCTA TCACAGAAAA CAGCAACACC
AAATCCAAAG TCACCATTAA CAATAATAGC AGTATCGAAA AGAGAAAAGC ATCATGTGAC
CCTCCCCAAT TAGGCTTGGA TCACGCTAGT GGTTTTGTCA AAGCCAGCAA TATTCGCTAG
ATAGAAGAGT ATTATAAGGA AAGCAACAAG TACATAGAAG TCGAGTGACA CTTAGCAAAA
TAGCTGCGAA ACTACAAAAC CATTCGCTCG CACATCCATA TAGAAAGTAG ATCTCTACAA
ATATCTAATA ACGCTTTGT
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| Protein sequence | MQYVGKVGGY VYNQWNSLNP STLSGAIDII VVEQPDGTLH CSPWHVRFGK FQIIKPSQKK
IDLYVNDVKT DLPMKLGDGG EGFFVFETDS RDGLSQSVLT SPVISPVSSA STSPIGSPQS
SGIGEDDIGR AEPELLDLNA NSVDIEDKIK LSDEPSPVLA GSSPKAATPT PSLQSKTFEK
VRKITQKLNI PSKIDINGDI VLDMDGYKPN AQKNIDNSDE LFKKIFLQEI KDSSAFVSKD
KNGNIRILNR DHLSPMEDDL MSVEGLVSEN EDDAQSLRTS ASVITSNTGS NTGDGSLPSS
SSESSKTYFK TLRLTSEQMQ KMKLHYGENK LTFKLSEGTA QIESYLYLWR ATTPIVISDI
DGTITKSDAL GHVLNLFGKD WTHPGVATLF TDIKANGYNI IYLTARSVGQ ADTTRQYLRG
IVQDNGVKLP QGPVILSPDR TMAALRREVI LKKPEVFKMA CLNDIKSLYF HSDQFAEPED
DERTPFYAGF GNRITDAISY RSVKIPSHRI FTINPNGEVH MELLELAGYK SSYLHIGELV
DQFFPPIKQV SSSDSSPGSP RSLNEEGFRD FQTEEKFNDV NYWREPLSFS DLSDLDDEET
ATPEPPKSPG LLSLRSFTSD SENIYDEKKA ATNPELNETR TRSRASSSPP ERPTSDLDDD
DDYTDDDYDE DEDDDYEDDD DYDEEEEEED YDEEEDFDEE DIDDDDIDED DGLPEEVQQK
LSITENSNTK SKVTINNNSS IEKRKASCDP PQLGLDHASG FVKASNIR
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