| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_81386 |
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| Symbol | |
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| ID | 4836899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | + |
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| Start bp | 2442529 |
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| End bp | 2444190 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 12 |
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| GC content | 46% |
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| IMG OID | 640388214 |
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| Product | predicted protein |
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| Protein accession | XP_001382696 |
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| Protein GI | 150864020 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
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| TIGRFAM ID | [TIGR02340] T-complex protein 1, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.672282 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATTCCA CGGCTCGTTC AGATACATTA TTCCTCGGAG CCCAGAAAAT CTCGGGCGAC
GACGTCCGTA ATCAGACAGT ATTGGCTACC CAGGCTGTGG CCAATGTCGT CAAGTCTTCA
TTAGGACCTG TAGGCTTGGA CAAGATGCTC GTCGATGACA TTGGTGACGT GACTGTGACA
AACGATGGTG CAACTATTTT GTCTTTACTA GACGTGCAGC ATCCCGCCGG CAAGATCTTG
GTGGAATTGG CCCAACAACA GGATCGTGAA GTTGGAGACG GTACCACCTC CGTAGTGATT
ATTGCCAGTG AGCTCTTGAA ACGAGCCCAT GAGTTGGTCA AGAACAAAAT ACACCCCACC
ACCATCATCT CGGGCTACCG TGTGGCGTTG AGGGAAGCTA TCCGTTACAT CAATGAGGTA
TTGTCGCAGC TGGTTGACAG CTTGGGCAAA GACACCATAG TAAATATTGC AAAGACTTCG
ATGTCGTCCA AGATCATTGG CTCTGACTCG GATTTCTTCT CCCAAATGGT TGTGGATGCC
ATGTTGGCGG TTAAGACGAC GAATGGCAAG GGTGAAACAA AATACCCAGT CAAGGCCGTT
AACATCTTGA AGGCACACGG CAAGTCATCG ACCGAATCGA TGCTCGTAGA TGGTTATGCC
TTGAACTGTA CTGTAGCTTC TCAGGCCATG GTCAAGTCTG TAAAAAATGC AAGAATCGCT
TGTTTGGACA TAAATTTGCA GAAGGCTAGA ATGGCTATGG GTGTTCAGAT AAATATCGAC
GATCCAGACC AGTTAGAGGA GATCAGAAAG AGAGAGTACG GCATAATCAT TGAGAGAATT
CGTAAAATCT TGGGTGCTGG AGCCAACGTC ATTTTGACCA CTAAGGGTAT CGATGACTTG
TGCTTGAAGG AATTCGTGGA AGCTGGCGCC ATGGCAGTCA GACGTTGTAA GAAGGAAGAC
TTACGTAGAA TAGCCAGAGC CACAGGTGCT ACATTAGTAA GCAGTTTGTC CAACTTAGAA
GGTGAAGAAA CCTTCGATGC TTCGTCATTG GGTTCTGCTG AAGAAGTTGT ACAGACCAGA
ATCAGCGATG ACGAATGTAT TTTGGTCAAG GGAACGAAGC AGCACTCTTC CTCTTCTATC
ATATTGAGAG GTCCTAACGA TTACTCTTTA GACGAAATGG AAAGATCCTT GCATGACTCT
TTGTCGGTTG TCAAAAGAAC CTTGGAAAGT GGCAATATAG TGCCTGGTGG AGGTGCTGTT
GAAACTGCTT TGAACATCTA CTTGGAAAAC TTCGCTACTA CAGTTGGCTC GAGAGAACAG
TTGGCCATTG CTGAGTTCGC TAATGCCTTG TTGGTAATCC CAAAGACTTT AGCTGTCAAT
GCAGCTAAGG ATGCTTCAGA TTTGGTTTCC AAGTTAAGAA CCTACCATGC TGCTTCGCAG
ACTGCTTTGC CAACTGACAA GAAGAGAAAG TACAAGAACT ACGGCTTAGA CTTGATCGAA
GGTAAGATTG TCAACGAAAT CTCCCACGGT GTCTTGGAGC CTACGATTTC TAAGGTCAAG
TCCTTGAAGT CGGCCTTAGA AGCATGTGTT GCCATCTTAA GAATTGATAC CATGATTGAG
GTCAACCCAG AAGCACCAAA AGAAGACCCT CACGACCATT AG
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| Protein sequence | MYSTARSDTL FLGAQKISGD DVRNQTVLAT QAVANVVKSS LGPVGLDKML VDDIGDVTVT
NDGATILSLL DVQHPAGKIL VELAQQQDRE VGDGTTSVVI IASELLKRAH ELVKNKIHPT
TIISGYRVAL REAIRYINEV LSQSVDSLGK DTIVNIAKTS MSSKIIGSDS DFFSQMVVDA
MLAVKTTNGK GETKYPVKAV NILKAHGKSS TESMLVDGYA LNCTVASQAM VKSVKNARIA
CLDINLQKAR MAMGVQINID DPDQLEEIRK REYGIIIERI RKILGAGANV ILTTKGIDDL
CLKEFVEAGA MAVRRCKKED LRRIARATGA TLVSSLSNLE GEETFDASSL GSAEEVVQTR
ISDDECILVK GTKQHSSSSI ILRGPNDYSL DEMERSLHDS LSVVKRTLES GNIVPGGGAV
ETALNIYLEN FATTVGSREQ LAIAEFANAL LVIPKTLAVN AAKDASDLVS KLRTYHAASQ
TALPTDKKRK YKNYGLDLIE GKIVNEISHG VLEPTISKVK SLKSALEACV AILRIDTMIE
VNPEAPKEDP HDH
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