| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_81376 |
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| Symbol | PMC1 |
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| ID | 4837338 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009042 |
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| Strand | + |
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| Start bp | 1190681 |
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| End bp | 1195253 |
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| Gene Length | 4573 bp |
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| Protein Length | 1201 aa |
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| Translation table | 12 |
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| GC content | 45% |
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| IMG OID | 640388653 |
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| Product | Ca2+-transporting P-type ATPase |
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| Protein accession | XP_001382444 |
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| Protein GI | 150863834 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0474] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01517] plasma-membrane calcium-translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CAGGGGCGGT GGACTTTAGC AAAGACCAGG GTTGGGACGG GGTTGCCGAA CAGATTCTCT
AGCCAGGGAG ACATAAGGCT GTCCTCTGGT GTGTGACTCT GGGACAGCTG AGATTTGATC
ACTGTGGCCC GATAAAACGA TTGCAAAATT GGCGCAGCGA GTCAAGTCAT CTGCGGCTAG
TATGGCACCG CGGCAAATGG CACAAGCAAT TCAGGCACAA GCAAAACCAA GAAGTCAGAT
CCACAAGCAA AATGCCAGTG ACGCTGGACT TGGAATTGAA ACGTGATTCA GCAGAGTCCT
CCAGTGAAGC ATTGCCTAAT GTATTTCCTG TGGCCAATTG GTGATTAAAT TTTAATAATT
TTATTTTGAT ATTATTTAAC CTCTATCGGT ATTTCCATCT TCGCAGTTAT TTATTTTTTT
TTGGAGCCAT CCAGAGACAC AGATTTCGCT ACGAACTGGA GTAGTATATG TAGACTTCAA
GATCACCGAA ATTTGAAATT TATTTTGGTT CTGGTTGGAT TCTTAGTTTG TTAGTACGCT
TTGTCAGATT TGTTTGAACA GGTGCTGTTG CCCTCTTCCT CGCAGTCCGC CATACTCAGC
TAGTCTATAG CGTCTCACAA GATCTATATA ATCTATAAAA GCCATAGGCT TAACTGATCT
TAATTTGTCC AAAGTATCAA ACTATCTTAT CTTACAATAC TTCAAAAAGA ATAGTGTATG
AATTATTATT ATCGTCATTA AGTTTATTTC CACATTATAA TCTACTATAG TCTTACTATA
GCCATATACT CACATCTCAT TCAGACCCCA TGTCTCCCAT AACTCCGGCT GAAAAGTTGG
CCAAGTCCAC CACGTTCACG CATCTCACAG CTACCACAAG CAATAACAGT ACAAACATAC
ACGATGCGAA CCATCTCTAC GTTTCTGCTC CAGATATTGA CGCTTCCAGC GTCAACTCCG
AAACTCCCTT GCACGATGAG ACAGACTTGA CATACGGTCC TCAACAGCAC AAGGGCGCTC
CGCCAGCTCC GCCAGCTCCC CTCCATAAAC TCGCCTCCAG GCTCACGTCT GTCTCCACCA
GGCGTGGCGA ACAGCAGGCG CTTATTTCGC ACCAGGAGCT CACAACTTTG CATGACCCCA
AGTCGCTCAA GACACTCCAT GATTTGGGAG GCTTCAACAG ACTCTTGTCA CTCTTGAACA
CTGATACCTT CCGGGGTTTG AACGACACCG ACTCCAGCGA TGCGGCTTTC CGAGTACATA
ACTGGGGTGC CAACAGATTG CCTACCAAAC GCCAGAGATC CTTCTTCCGC TTATGCTTTG
AAGCATTGAA GGACAAGGTG TTGATTCTCT TGTCTGTAGC AGCAGTTGTC TCGCTTGCTT
TGGGACTCTA CGAGACCTTT GGTGAGGGAA CCATGTACGA TGACGAGGGC AAACCGATGC
CCAAAGTCGA CTGGGTGGAA GGTGTAGCAA TTTTGGTTGC TGTAGCCATT GTTGTATTGG
TTGGTGCTGC CAACGACTAC CAAAAAGAAA GACAGTTTGC TCACTTGAAC GCGAAGAAGG
AAGACCGTGA GTTGATCGTA ATACGAAATG GCCAGCAGAA GCTCATTTCC ATATACGACT
TGTTGGTTGG TGACATCATA AACTTGCAGA CCGGTGACGT TGTGCCTGCT GACTCCATTT
TGTTCCAGGG TGAAGTTGAA TGTGACGAAT CGGCTTTGAC TGGTGAATCC AATACCATCA
AGAAAGTTCC TGCCGAAGAG GCCATGGAAT TCTACAAGCT GCAATTGCCT ACTAATGAAG
ATGTAGGTTC TACCACTGTT AAGTTCAAGG ACCCCTATTT GATATCAGGA GCCAAAGTAC
TTTCTGGTCT TGGAAATGCC ATTGTTACAG CCGTGGGTGT CAACTCTATT CATGGAAGAA
CCATGATGAG TTTGAGTCAC GAGTCTGAAT CGACTCCCTT GCTGGAGCGT TTAGACAATT
TGGCTGAGGG TATCTCTAAG TACGGTTTCT TAGCTGCCCT ATTATTGTTC TTCATCTTGC
TCATCAGATT CTGTGTCAAC ATATCTGGTG ACCGTTCGTT CAGCCATCTC AAGAGCGCTG
AAAAGGGTAA AAAGTTCTTG GACATATTAA TTACCGCAAT CACCATCGTA GTTGTGGCTG
TTCCTGAAGG TTTGCCCTTG GCTGTAACGT TGGCTTTGGC GTTTGCTACA ACCAGAATGG
CCCAGAACGG TAACTTAGTC AGAGTATTGA AATCGTGTGA AACTATGGGT GGTGCCACTG
CTGTTTGTTC TGATAAGACA GGTACTTTAA CCGAGAACAG AATGAGAATC GTTAAAGGCT
TCTTTGGCTT GGACGCTGCT ACCAACTCTC CTCTACAATT CGACGATACT ATTGAAGGCA
ATGGACCAAA GTCTCCCGAA ATCATCAGTA AGTTGTTTGA TGACTTCAAG GTCTTCCTTT
GCACTAACAT CACTCTCAAC TCCACTGCCT TTGAAAATCC TGACTACGAC GAAGCCAAGG
AATCACTTGC CAGAACCAAG CCAAAGCCAA GATCTTTTTT CTCTCAGTTG TTGTCCAAAA
ACAAGACTAA CCCAGTAGAG TTGGGTGTGA GCTCTGAACC ATACTTAGGA AACAAAACTG
AATCCGCATT ATTGATATTG GCCAAACAGA GGTTCGGTTT GTTCCAGGAC AAGCCTTTAG
AGCAACATCG CCAAGAAGGT GCAAAGGACA TCGTTCAAAT TATTCCGTTC GAATCGTCCA
GAAAATGGGC TGGTATAGTC ATGAAGATCG AGAATGGTTA CCGTGTTTAC GTCAAGGGTG
CAGCTGAAAT CGTGTTCAAG AACTGTGGCT ACCAATACAA CAACGAAGGT AACTTGATCA
CTTTGGACAG AAACATGCGC GATTTGTCTT TAAGCAAGAT CGATGAGTTT GCCAACGATG
CCTTGAGAGC TATTGCATTG GGTCACCGTG ATTTCGTTGG TGTCAAGAAC TGGCCACCTG
CTGAATTGGC TAGTGCTGAT AACAAGAACG AAGTCGACCC AGCTTTGCTT GTTTACGTAT
CGTCAAACGA GTCTTCCAAG CCTTTTATCT TGGACGCTTT GGTTGGTATC CAGGATCCAT
TGAAGGAAGG TGTTCCTGAA GCTGTATTGA AGTGTAAGCA TGCCGGTGTC ACTGTCAGAA
TGGTTACTGG TGATAACTTG ATCACTGCCA AGGCGATCTC TAAGGGATGT AATATCTTGA
CTCCAGACGA CTTGTCTAAC GAATATGCCT TTATGGAAGG TCCAGCATTC AGAAAGTTGT
CAGTAGAAGA AAGAAACTTG GTTGTTCCTC AATTGAGAGT GTTGGCCAGA TCTTCGCCCG
AAGACAAGAG AATCTTGGTA GACACCTTGC GTAAGTCTGG CGAAGTTGTT GCTGTAACTG
GTGATGGTAC CAATGATGCT CCTGCCTTGA AGTTGGCTGA TGTTGGGTTT TCCATGGGTA
TTGCTGGCAC TGAAGTTGCC AGAGAGGCCT CGGATATCAT TTTGATGACC GACGATTTCA
CCGATATTGT TCAAGCCATC AAGTGGGGTA GAACTGTTGC CACTTCTATC AAAAAGTTTA
TTCAGTTCCA GTTGACTGTC AACATCACTG CCTGTGTCTT AACGTTTGTT TCGGCCGTTG
CTTCTTCTCA AAACCAATCC GTTTTAACTG CCGTTCAGCT TTTGTGGGTC AACTTGATTA
TGGATACATT AGCAGCACTT GCTTTGGCCA CCGACAAACC TGACGACTCG TTCTTGAACA
GAAAGCCAGC CGGCAGAACT GCCCCTTTAA TTTCAACCTC TATGTGGAAG ATGATTTTGG
GTCAATCTAC CGCTCAGTTG ATCATCACCT TCATCTTACA CTTTGCCGGC CGTCAGTTGT
TCTTCGGTGG TGCTACCACT GACAACCACC AGGACAAGCA GTTAGATGCC ATGACTTTCA
ACACTTTCGT CTGGTTGCAA TTCTGGAAGT TGTTTGTTAC AAGAAAATTG GACGAGGCGG
ATGAAGTCAC CACTGTAAGA GGTAGAATCA CACGTGAAAA CTTGGATTTC TTCCAGCACT
TGTTTAGAAA CTGGTACTTC ATCACCATTG CCGTTATCAT TGGAGCTGCT CAAATATTAA
TTATGTTTGT TGGTGGTGCT TCTTTCAGTA TTGCTAGACA AACACCAGGA ATGTGGGCCA
CCGCTATTTT GTGTGGTTTC ATTTCGATTC CTGCCGGTCT TCTTATCAGA ATTATTCCAA
ACATTTGGGT TGAAAAGATT TTCCCAACGA AGGCGTTTAA CGAATTGCTC TACTATGTTG
GTTTCAACTG GTTGAGCGCC AAGAAGAGAG CCATCCACAG CGGCAAGGAA GTCGAAGAAG
ACGTAGACTT GGAGAAGTCA TCCTCGTTGT CCAGTACCGA TAACAGAGCC GAGAAGGTGC
TTGAGCCTAA CCAAAAGTAG ACTACATTTA CTAATAGCAT TCTTCTACGT AGATTTAATT
TATACATTGC ATGCATACTA AAATGTGGAT AATACACATC TGTAAATATA ATTGAGTGCC
AATATAGGCT TAG
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| Protein sequence | MSPITPAEKL AKSTTFTHLT ATTSNNNIDA SSVNSETPLH DETDLTYGPQ QHKGAPPAPP
APLHKLASRL TSVSTRRGEQ QALISHQELT TLHDPKSLKT LHDLGGFNRL LSLLNTDTFR
GLNDTDSSDA AFRVHNWGAN RLPTKRQRSF FRLCFEALKD KVLILLSVAA VVSLALGLYE
TFGEGTMYDD EGKPMPKVDW VEGVAILVAV AIVVLVGAAN DYQKERQFAH LNAKKEDREL
IVIRNGQQKL ISIYDLLVGD IINLQTGDVV PADSILFQGE VECDESALTG ESNTIKKVPA
EEAMEFYKSQ LPTNEDVGST TVKFKDPYLI SGAKVLSGLG NAIVTAVGVN SIHGRTMMSL
SHESESTPLS ERLDNLAEGI SKYGFLAALL LFFILLIRFC VNISGDRSFS HLKSAEKGKK
FLDILITAIT IVVVAVPEGL PLAVTLALAF ATTRMAQNGN LVRVLKSCET MGGATAVCSD
KTGTLTENRM RIVKGFFGLD AATNSPLQFD DTIEGNGPKS PEIISKLFDD FKVFLCTNIT
LNSTAFENPD YDEAKESLAR TKPKPRSFFS QLLSKNKTNP VELGVSSEPY LGNKTESALL
ILAKQRFGLF QDKPLEQHRQ EGAKDIVQII PFESSRKWAG IVMKIENGYR VYVKGAAEIV
FKNCGYQYNN EGNLITLDRN MRDLSLSKID EFANDALRAI ALGHRDFVGV KNWPPAELAS
ADNKNEVDPA LLVYVSSNES SKPFILDALV GIQDPLKEGV PEAVLKCKHA GVTVRMVTGD
NLITAKAISK GCNILTPDDL SNEYAFMEGP AFRKLSVEER NLVVPQLRVL ARSSPEDKRI
LVDTLRKSGE VVAVTGDGTN DAPALKLADV GFSMGIAGTE VAREASDIIL MTDDFTDIVQ
AIKWGRTVAT SIKKFIQFQL TVNITACVLT FVSAVASSQN QSVLTAVQLL WVNLIMDTLA
ALALATDKPD DSFLNRKPAG RTAPLISTSM WKMILGQSTA QLIITFILHF AGRQLFFGGA
TTDNHQDKQL DAMTFNTFVW LQFWKLFVTR KLDEADEVTT VRGRITRENL DFFQHLFRNW
YFITIAVIIG AAQILIMFVG GASFSIARQT PGMWATAILC GFISIPAGLL IRIIPNIWVE
KIFPTKAFNE LLYYVGFNWL SAKKRAIHSG KEVEEDVDLE KSSSLSSTDN RAEKVLEPNQ
K
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