Gene PICST_76567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_76567 
Symbol 
ID4837284 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp83619 
End bp84539 
Gene Length921 bp 
Protein Length242 aa 
Translation table12 
GC content40% 
IMG OID640388599 
Productpredicted protein 
Protein accessionXP_001382248 
Protein GI126131446 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0694] Thioredoxin-like proteins and domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000975228 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGTTTTAAG AGTCTACGTC TATATCTACA TCTATTCAGT TACATTTAGC TGTTATTCCT 
ACTTCTAAGA GTTTAGGAGA ATATAAGATT CTTTGATTAA TATTGAAAAA TGTTGAGAAG
CCAAATCACT CAGCTCTTTG GAAGGAGATT TCTCTCGTTC CAGACCCTAC CTACGCCCAA
CCCAAATGCA TTGAAGTTCA TATCTCCAGA ATGCAATATC TTGCCCATGG CTGGAAAAAC
ATTTGAGTTC ACATCCACTT TGCAATCAGT GCACTCTCCT TTGGCACTCA GATTATTCAA
GATCCCAGGA GTTAGATCTG TGATGCTTGG AGAAAACTTT CTCACAGTCA ACAAACAAGA
CCATATCAAC TGGGCCAACT TGAGGCCGGA AGTCGTGGAG TTGATGGACG ACTTTTTGAC
CACAAAACAA GAACCTTCCA TAACCAAGGA GCTTGTAGAC CAGAGCCAAC AAGAATCTGA
AGTTGCCGAG GCCGAAGACT CTGAAATTGT TTCTATGATA AAGGAGTTGA TAGAAACCAG
AATAAGACCA GCTATCCAGG ACGATGGCGG TGATATTGAG TACAAGGCAT TTGATGAAGA
AACGGGAACA GTATTCTTGA AGTTGCAGGG TGCCTGTAAG TCCTGTTCGT CTAGTGAAGA
CACCCTTAAG CATGGTATTG AGTCCATGTT AATGCATTAC ATCGAAGAAG TTAGAGAAGT
GGTCCAGATC TTAGATCCAG AAGAAGAGAT AGCCTTAAAG GAGTTCGACA AGTTGGAACA
ACAGTTGCAA CAGAAAAGAT TGAGCCAACA GAACGAAGTT CCTCCTCCTT CGTTGTAAGC
TCTTCAACTA CTAAATACGG ATATATGTGG GTACGGATAG TTTTTAGAAA AGGTTTTTCT
ATCAATGTAT AACTTATTTA T
 
Protein sequence
MLRSQITQLF GRRFLSFQTL PTPNPNALKF ISPECNILPM AGKTFEFTST LQSVHSPLAL 
RLFKIPGVRS VMLGENFLTV NKQDHINWAN LRPEVVELMD DFLTTKQEPS ITKELVDQSQ
QESEVAEAED SEIVSMIKEL IETRIRPAIQ DDGGDIEYKA FDEETGTVFL KLQGACKSCS
SSEDTLKHGI ESMLMHYIEE VREVVQILDP EEEIALKEFD KLEQQLQQKR LSQQNEVPPP
SL