Gene PICST_76547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_76547 
Symbol 
ID4836860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp448957 
End bp450031 
Gene Length1075 bp 
Protein Length287 aa 
Translation table12 
GC content43% 
IMG OID640388175 
Productpredicted protein 
Protein accessionXP_001382321 
Protein GI150863748 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.24192 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
AGAGATAACA AGAATTACTT AAAGTTCGAC TCTAACTACT CATTTTCCTC ACCCTGGTGC 
TTCTATAGTG TGTCCAGAGT GAATCTCTAG CGCACCTACC TAGTATCTAC AGTAATAATA
CCAAAATGGC TCCTCAAGTA TTCATGCTAA TCAAGTTGTT GTTCAACCCA GATGTATCGA
AAAAGCTCAT CTTGCAAATG GCTCTCAAGC AGATGAGTGC CATTGGCTAT GCCAAGGTCG
CTGCCTTGCT CTTGTCGTTG TTGACCGTGG GAGTGTCTTC TGTTATTAGG ATTCCCCAGA
TCAGAAAGAT CCTCAACCCA AAGTTGTTGG AAAACAAGAT CAAGGTCGTC AACGGCTTGT
CATTGGAGAC ATACTCTATC GAGTCGTTCA ACTACTTGGT CCACGTCGTG TTCAACTCTC
AGAACAACAA CCTGTTTTTG AATTACGGTG AAAGCTTGTT ACTCGGTTTA CAGAATGTGA
TCATTATCTT ATTGATTAAG TATTACCGTG CTATAGGCTC TGGTTCTATT CCAGACTTAC
AGGACAAGAC CTGGAAGGAA TCGGCTGAAA TTGTCGGCAG AGAATTGGCA GAGCCTGTCG
GCTGGATTTT GGGAACTCTG CTTTTCTTGA CGAAGTTGGC ACCAACCAGC TTGATCACTT
TATTGCAGAT CTTGAACATT CCCATTTCCA TCATTTCCAA GTTGCCGCAA ATCAGACAGA
ACAGCATCTT GAAGACGACA ACACACTTGT CCAGTATCAC TCTCCACGCC AATGTAGCCG
GTTCGTTGAT TAGAGTCTAC ACCACCATCC AGGACTTGAG TGCCAAGTCT AAGAGAAGCA
AGGTAACTTC TGGCGACTGG GTGTTGTTGG GAGGCTACTT GACCTCGCTT ACTTTGAACT
CGGTTTTGGT TGGCCAGCAG TATTTCTACG ATGGCAACCA GCTCAACAAG AAGGAAGAAG
AAGAAGAAGA GCCTAAGAAA CTGGTCTGAT TGTCATTAAG TTGAATAATC TAGTATGTTG
GTGCGACTAT TTAGACTCTA CTATTGATAT TTATAATGTA AGTATATCTT TATGG
 
Protein sequence
MAPQVFMLIK LLFNPDVSKK LILQMALKQM SAIGYAKVAA LLLSLLTVGV SSVIRIPQIR 
KILNPKLLEN KIKVVNGLSL ETYSIESFNY LVHVVFNSQN NNSFLNYGES LLLGLQNVII
ILLIKYYRAI GSGSIPDLQD KTWKESAEIV GRELAEPVGW ILGTSLFLTK LAPTSLITLL
QILNIPISII SKLPQIRQNS ILKTTTHLSS ITLHANVAGS LIRVYTTIQD LSAKSKRSKV
TSGDWVLLGG YLTSLTLNSV LVGQQYFYDG NQLNKKEEEE EEPKKSV