Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_76547 |
Symbol | |
ID | 4836860 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | + |
Start bp | 448957 |
End bp | 450031 |
Gene Length | 1075 bp |
Protein Length | 287 aa |
Translation table | 12 |
GC content | 43% |
IMG OID | 640388175 |
Product | predicted protein |
Protein accession | XP_001382321 |
Protein GI | 150863748 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.24192 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | AGAGATAACA AGAATTACTT AAAGTTCGAC TCTAACTACT CATTTTCCTC ACCCTGGTGC TTCTATAGTG TGTCCAGAGT GAATCTCTAG CGCACCTACC TAGTATCTAC AGTAATAATA CCAAAATGGC TCCTCAAGTA TTCATGCTAA TCAAGTTGTT GTTCAACCCA GATGTATCGA AAAAGCTCAT CTTGCAAATG GCTCTCAAGC AGATGAGTGC CATTGGCTAT GCCAAGGTCG CTGCCTTGCT CTTGTCGTTG TTGACCGTGG GAGTGTCTTC TGTTATTAGG ATTCCCCAGA TCAGAAAGAT CCTCAACCCA AAGTTGTTGG AAAACAAGAT CAAGGTCGTC AACGGCTTGT CATTGGAGAC ATACTCTATC GAGTCGTTCA ACTACTTGGT CCACGTCGTG TTCAACTCTC AGAACAACAA CCTGTTTTTG AATTACGGTG AAAGCTTGTT ACTCGGTTTA CAGAATGTGA TCATTATCTT ATTGATTAAG TATTACCGTG CTATAGGCTC TGGTTCTATT CCAGACTTAC AGGACAAGAC CTGGAAGGAA TCGGCTGAAA TTGTCGGCAG AGAATTGGCA GAGCCTGTCG GCTGGATTTT GGGAACTCTG CTTTTCTTGA CGAAGTTGGC ACCAACCAGC TTGATCACTT TATTGCAGAT CTTGAACATT CCCATTTCCA TCATTTCCAA GTTGCCGCAA ATCAGACAGA ACAGCATCTT GAAGACGACA ACACACTTGT CCAGTATCAC TCTCCACGCC AATGTAGCCG GTTCGTTGAT TAGAGTCTAC ACCACCATCC AGGACTTGAG TGCCAAGTCT AAGAGAAGCA AGGTAACTTC TGGCGACTGG GTGTTGTTGG GAGGCTACTT GACCTCGCTT ACTTTGAACT CGGTTTTGGT TGGCCAGCAG TATTTCTACG ATGGCAACCA GCTCAACAAG AAGGAAGAAG AAGAAGAAGA GCCTAAGAAA CTGGTCTGAT TGTCATTAAG TTGAATAATC TAGTATGTTG GTGCGACTAT TTAGACTCTA CTATTGATAT TTATAATGTA AGTATATCTT TATGG
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Protein sequence | MAPQVFMLIK LLFNPDVSKK LILQMALKQM SAIGYAKVAA LLLSLLTVGV SSVIRIPQIR KILNPKLLEN KIKVVNGLSL ETYSIESFNY LVHVVFNSQN NNSFLNYGES LLLGLQNVII ILLIKYYRAI GSGSIPDLQD KTWKESAEIV GRELAEPVGW ILGTSLFLTK LAPTSLITLL QILNIPISII SKLPQIRQNS ILKTTTHLSS ITLHANVAGS LIRVYTTIQD LSAKSKRSKV TSGDWVLLGG YLTSLTLNSV LVGQQYFYDG NQLNKKEEEE EEPKKSV
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