Gene PICST_76484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_76484 
SymbolGLG2 
ID4837184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp2110277 
End bp2111966 
Gene Length1690 bp 
Protein Length411 aa 
Translation table12 
GC content45% 
IMG OID640388499 
Productglycogenin glucosyltransferase 
Protein accessionXP_001382632 
Protein GI150863971 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1442] Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CCGCCGTCTG ATCCACCTCA ATTGAATCGT ACAGCCTCTG TTACACTTCT CAGTTCGCTA 
TTCTCATCGC CTCGGTCCAT ATATCCTTAT CAGTAGCTGT CTCCTGCAGA CTGCCACCCC
TAAAGAACCA CACTAGTCGT TTCACTCTCT GGTTCATCTC TTGAGATCGA ATAACGATTG
ATACTTATAT ATTCTAGATA TAGTACCACT CTTGGCTCTC CAACTTTACT ATTGCCGAAA
TGTCAAAAGC TTATGTCACC CTTCTCACCA ACGAGTCGTA CCTTCCTGGA GCCCTCACCT
TGGCCCAGAA GTTGAAGACC GAGTTGAAGA CCAAACACAA GTTGGTCATC TTGATCGATT
CGTCGGCCTT GTCTACTGAG TCGATCGACT TAATCAAGCA AGTCTACGAT GTCGCCATTG
CCATCGACGA CGACCTCATC AACGCTCCTC TTGACAAGCT TGTTCAACGT TTGGGCAGAT
CAGAGTTGTC CATCACCTTC ACCAAAGTCT TGTTGTGGAA CTTGACCGAT TATGACACCT
TGATCTACTT GGACAGTGAC ACCTTGCCTT TGGCTGATCT TGACCACTTA TTTGAAGAGT
ACAAGGATTT GACGGCTGAG CAAATCGCTG CTTCTCCAGA TGCTGGCTGG CCCGATATCT
TCAACTCAGG AGTGTTGGTG TTGAAGCCTG ATGCTGATGT TTTCTCCAAA TTGTTGGAAT
TTACTACCGT AGACAACAAC ACGTTTGACG GAGCCGATCA GGGCTTGTTG AACGAGTTTT
TCAATGTCGC TTCTGCAGGT AAGAACTGGG TCCGTTTGCC TTACGTCTAC AACGTCACTC
CCAACTACTC GGGTGCCTAT CAGTACTTGC CAGCGTTGCA CCGTTTCTTC AGCTCGATCA
AGTTGTTACA CTACATCGGA CAAACTAAGC CTTGGCACGC TGAAGACATC TTGGGCACGG
ACTTTGACAA CTTGCACCAC TACTGGTGGG GCGACTTCAA TAAGTTTTAT GCTAAGGACG
CAACGCTCAA GGCTAAGTTG TTGAGCATTC CAAAAGGAGA AGCTTACAAC TTGAACTTTG
CCAAATACCT GAACCAATGG GATGCTGATA AAGATGCAGG TGCCAAATTC CACATTGCTT
TAGAAAAAGA TACCCCAGCC CAGCCTCCTC TCTTTCCCTG GGAACATAAG GAAGAAAGGA
CTCCTACAAG AGTTTTCGAA TCTCATGCTC CAGCTGTCGA AGAATCTTCT GGTGTTCCTA
AGAGCAAAGT AGAAGATGAC TTGAGAGAAA GCATAGAAAC CCTATCTAAC GTCAATGTGT
CCAAGGATGA AGGAGTCAAG AGTCCCCCAT TGCTGCAGAG CTACGGCTTT GGAAAACAAT
CCAAGGGCTT CAACCCAGAC AAGTCTTTAG CTGAGGTTGC AAAGCTTCCT CTCAAGTTCT
TGTCCAAAAA CAAGAACAAG GGAGAAGAGA AGTAATTCTC GTCCCACTGC TCATTTCCAT
ATGTTTACAG CTATGAAAAT GTTGTTTTTT ACACAACAAG GTTGATTCTT TTGAACTCTT
TGTTCGTTTT CAATTCTGAA TTCCCTATCC TTAATTTATT TGACCTCACA CTGACCTTCG
AGTCGGCTAT ACTTGTGTTT TAGTTTCTAA TAGAATTAGA CGAGAATGTA CTTTATAATA
TGCAAATAAT
 
Protein sequence
MSKAYVTLLT NESYLPGALT LAQKLKTELK TKHKLVILID SSALSTESID LIKQVYDVAI 
AIDDDLINAP LDKLVQRLGR SELSITFTKV LLWNLTDYDT LIYLDSDTLP LADLDHLFEE
YKDLTAEQIA ASPDAGWPDI FNSGVLVLKP DADVFSKLLE FTTVDNNTFD GADQGLLNEF
FNVASAGKNW VRLPYVYNVT PNYSGAYQYL PALHRFFSSI KLLHYIGQTK PWHAEDILGT
DFDNLHHYWW GDFNKFYAKD ATLKAKLLSI PKGEAYNLNF AKYSNQWDAD KDAGAKFHIA
LEKDTPAQPP LFPWEHKEER TPTRVFESHA PAVEESSGVP KSKVEDDLRE SIETLSNVNV
SKDEGVKSPP LSQSYGFGKQ SKGFNPDKSL AEVAKLPLKF LSKNKNKGEE K