Gene PICST_76328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_76328 
SymbolMES1 
ID4836672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp877187 
End bp879574 
Gene Length2388 bp 
Protein Length757 aa 
Translation table12 
GC content46% 
IMG OID640387987 
Productmethionyl tRNA synthetase 
Protein accessionXP_001382405 
Protein GI126131760 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0143] Methionyl-tRNA synthetase 
TIGRFAM ID[TIGR00398] methionyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ACGACGCCTT CGTGCTCAAA GTGTTTCTGA CATCCCTGCC ATAATGTCTG CGTTGTATGC 
TTCCAAAAAG TCTACCTTAG AGGCATTAGC CACCAACTTG AAGCTCTCCA TTGCTTCATC
AGCTTTCCAG AAACAAGTCT CGGTTTCTGT CAATGAGGAT GCTGACTCCA CAGCCTTGTT
GGTTGACAAA AAGGCCGGTT TTGAGTTATC TGAACCCAAT GCCGTTGTCA AGTATCTCTC
CAGCGACTTT ACTGATGCTT CTGGTGCCAT TGCCTTTGAA GAGTCTCAGT TGTACCCAGC
ACTCAAGGCT AACTCTGCTG ACAAAATCAG CCAAATTGCC ACTCCAGCAT ACTTTGAAAA
GGCTGAGATC ACGGCAGCTC AGATCATCTT GTTCTCCGCA CTCTACCCAG CTTTGAAGGA
CTCGAAGTCC ACTTCCGAAA CCACGGAAAT AGCAAAGTGG TTCCAGGATT TCGCATCCAT
CGAAGTTGTT CAGTCCGGAA TCAAGCACGC TCTCTCTATC ACCACTTTGG AAAGACCCAA
GGCCGTCAAT ACCGGAGCAC AGAAAGTCAA GACAGGCCAC TTGGTTAAGC CACAGGCTGA
GAGGATCGTC CCTAAAGACA ATGAAAGAAA CATCTTGATC ACATCGGCTT TGCCTTATGT
TAACAATGTC CCTCATTTGG GTAACATCAT TGGCTCAGTA TTGTCGGCTG ATATCTACGC
TCGTTACGCT AAGAATAGAA ACTACAACGC TGTCTATGTA TGTGGTACTG ACGAATACGG
CACTGCTACT GAAACCAAGG CTCTTGAAGA AAAAGTCACC CCCCAGCAGT TGTGTGATAA
GTATCACAAG ATCCACAAGG AGGTGTACGA TTGGTTTGAC ATTGGTTTCG ACTACTTCGG
CAGAACTACA ACTCCCTTAC AGACAGAAAT CGCCCAGGAC ATCTTCACCA GGTTGCACAA
GAACAACTAC TTGGAAGAAA GAACTACCGA ACAGTTGTAC TGTGAAGAGC ACAAGTCGTT
TTTGGCCGAT CGATTTGTAG AAGGCACTTG TCCCCACTGT CAGTACGAAG ATGCCAGAGG
TGACCAGTGT GACAAGTGTG GGAACTTGCT TGACCCCTTG CAGTTGATCA AGCCACGCTG
TAAAGTAGAT GGAGCCACTC CTGTAGTTAG AGAATCCACT CATATTTACC TTAAGTTAAA
TGAATTGGAA GGAGAGTTGG CCGAGTGGGT CGATCACGCC TCTTCGCATG GCGAATGGTC
CAAGAATGCT AAGACCATCA CGGCTTCGTG GATCAAGCGG GGTTTGGAAC CCAGATGTAT
CACAAGAGAC TTGTCCTGGG GTACACCGGT TCCTTTGGAA GGGTATGAAG AGAAGGTGTT
GTATGTGTGG TTTGATGCCA CCATCGGGTA CGTTTCCATT ACCGCCAACT ACTTCAAGGA
CCATAATGGT GACGACTGGC GCAAGTGGTG GAAGAATCCC GAAAATGTAG ACTTGTACCA
ATTCATGGGT AAGGACAATG TTCCTTTCCA TACAGTAGTG TTCCCAGCTT CACAAATCGG
TACCAGAGAC GTCTGGACCA AATTGCACCA CTTGAGCACT ACTGAATACT TGCAATACGA
AAATGGTAAG TTCTCTAAGT CCAGAGGAGT AGGTGTATTT GGTAACTCTG CCAAGGACAC
CGGTATTCCA GCCTCTGTCT GGAGATACTA CTTGGCTTCT GTGAGACCAG AGACATCTGA
CTCCCAATTC TCGTGGGAGG AGTTCGTCAC CAAGAACAAC TCGGAATTGC TTGCCAACTT
GGGTAACTTT GTCAACAGAA TCGTTAAGTT TGTCATCGCC AAATACAATG GGGTCATTCC
CAAGTTTGAC ACAAAGAACG TTCCTGACTA CGAAAAGTTC GAAACCGAAG TTAACCAGTT
GTTGAAGTCT TACGTCGATA CCATGGAGGC TGTCAGTTTG AGAAAGGGTT TGGAACTCGC
TATGGCCATC TCATCTCGTG GTAACCAGTT CTTGCAAGAC AACAAGTTGG ACAACTCGTT
GTACGCCAAC CTCCCAGACA AGTCCGATGC CGTTGTCGGT GTAGCCTTGA ACTTGGTCTA
CTTAGTCAGT GCCATCATAT TCCCATTTAT GCCTGAAACT ACCAAGCAGA TCAACGAAAT
TTTGAACGCT CCAGCCTTGT CCATCACTGA CAAGTTCGAG TTGGTGTTGG AAGCTGGCCA
CAATATCGGC AAAGCCCAAT ACTTGTTCAA GAGAATCGAC GAAAAGAAGA TTGCTGAATG
GAGAAGCTTG TATGGGGGAC AACAAGAGAA GAAATAGACA AGAATAGAGA TTTATGGTAG
AGTGTTATGA TTATATAAAC AATGTATGTT TAATGTAAAT AGTTGAAG
 
Protein sequence
MSALYASKKS TLEALATNLK LSIASSAFQK QVSVSVNEDA DSTALLVDKK AGFELSEPNA 
VVKYLSSDFT DASGAIAFEE SQLYPALKAN SADKISQIAT PAYFEKAEIT AAQIILFSAL
YPALKDSKST SETTEIAKWF QDFASIEVVQ SGIKHALSIT TLERPKAVNT GAQKVKTGHL
VKPQAERIVP KDNERNILIT SALPYVNNVP HLGNIIGSVL SADIYARYAK NRNYNAVYVC
GTDEYGTATE TKALEEKVTP QQLCDKYHKI HKEVYDWFDI GFDYFGRTTT PLQTEIAQDI
FTRLHKNNYL EERTTEQLYC EEHKSFLADR FVEGTCPHCQ YEDARGDQCD KCGNLLDPLQ
LIKPRCKVDG ATPVVRESTH IYLKLNELEG ELAEWVDHAS SHGEWSKNAK TITASWIKRG
LEPRCITRDL SWGTPVPLEG YEEKVLYVWF DATIGYVSIT ANYFKDHNGD DWRKWWKNPE
NVDLYQFMGK DNVPFHTVVF PASQIGTRDV WTKLHHLSTT EYLQYENGKF SKSRGVGVFG
NSAKDTGIPA SVWRYYLASV RPETSDSQFS WEEFVTKNNS ELLANLGNFV NRIVKFVIAK
YNGVIPKFDT KNVPDYEKFE TEVNQLLKSY VDTMEAVSLR KGLELAMAIS SRGNQFLQDN
KLDNSLYANL PDKSDAVVGV ALNLVYLVSA IIFPFMPETT KQINEILNAP ALSITDKFEL
VLEAGHNIGK AQYLFKRIDE KKIAEWRSLY GGQQEKK