Gene PICST_76246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_76246 
Symbol 
ID4837253 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009042 
Strand
Start bp713708 
End bp714722 
Gene Length1015 bp 
Protein Length88 aa 
Translation table12 
GC content38% 
IMG OID640388568 
Productpredicted protein 
Protein accessionXP_001382902 
Protein GI126132754 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2126] Ribosomal protein L37E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.304139 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
AATATAGATA GCAAACATGG GTAGTACGTG AGGATCTACA AGAGGATGCA GCTGTGAAGA 
GCAGCCATCG TCTCCAATGT ATAGAGTGCT GAGGACAATG CGATGAAAAT GAAAGATGAA
AAATTTGAGA TGCCACTAGA AATCCAGAAG AATACCATAG ACTTCCAGAG TACAAATGAT
AAGAATGAAC AAGAAGACGA TCAACGTGAT ATTTAACTTC AATCAGGACA ATAGTATCAT
TTGAAGAATT CTTGATCCAT CAAAGAAGAA ATTTCAGACA TTGAACGTCA AAGATGGAGC
ATTTTTCACC AGTAGACATG AACAAATTTG AATGAAACGA CTGTATGTTC AATCTTGTGG
AAGAACTACT TTTGTGAAGA GGATCGAGTA TTGCAACATA TGTCACTGTC ACATTTCCAC
CACCAGAAGC CAGGCTCACC ATATCAAGAC TATTTCAATT TCCTTGCCAT ATTCCTTCCG
TATAAGATAT AAGTCATAGC AGACAAATTC GGAACATTTT ACATTTTTCA TCTCATCGCA
TCACTTCACC TCTCGTTTAT TCGAAAGGAA CCATACTAAC ATAACAATAG AGGGTACTCC
ATCTTTAGGT AAGCGTCACA ACAAGTCCCA CACTTTGTGT AACAGATGTG GCCGTCGTTC
TTTCCACGTC CAAAAGAAGA CTTGTTCTTC TTGTGGATAC CCAGCTGCCA AGTTAAGATC
CCACAACTGG GCTTTGAAGG CTAAGAGAAG AAGAACCACT GGTACCGGTA GAATGGCTTA
CTTGAAGCAC GTTTCTAGAA GATTCAAGAA CGGTTTCCAA ACCGGTGTCG CCAAGCCTCA
ATCCGCTTAA ATTAAACGCT ATCCAAGGAA CCAAACCATC CAATAATTTC ATAAAGCAAA
CAATAGGGGT TGTTTTACAT TTCACATAAT TTTTTGGTTG TTGTGTTAAT ATAGTATTTA
ATTTTCGTTT ATATTGAAGT TTTTACGCAA TTCAAATAAA TCATTGTATC ATAAG
 
Protein sequence
MGKGTPSLGK RHNKSHTLCN RCGRRSFHVQ KKTCSSCGYP AAKLRSHNWA LKAKRRRTTG 
TGRMAYLKHV SRRFKNGFQT GVAKPQSA