Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_76246 |
Symbol | |
ID | 4837253 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009042 |
Strand | - |
Start bp | 713708 |
End bp | 714722 |
Gene Length | 1015 bp |
Protein Length | 88 aa |
Translation table | 12 |
GC content | 38% |
IMG OID | 640388568 |
Product | predicted protein |
Protein accession | XP_001382902 |
Protein GI | 126132754 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2126] Ribosomal protein L37E |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.304139 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | AATATAGATA GCAAACATGG GTAGTACGTG AGGATCTACA AGAGGATGCA GCTGTGAAGA GCAGCCATCG TCTCCAATGT ATAGAGTGCT GAGGACAATG CGATGAAAAT GAAAGATGAA AAATTTGAGA TGCCACTAGA AATCCAGAAG AATACCATAG ACTTCCAGAG TACAAATGAT AAGAATGAAC AAGAAGACGA TCAACGTGAT ATTTAACTTC AATCAGGACA ATAGTATCAT TTGAAGAATT CTTGATCCAT CAAAGAAGAA ATTTCAGACA TTGAACGTCA AAGATGGAGC ATTTTTCACC AGTAGACATG AACAAATTTG AATGAAACGA CTGTATGTTC AATCTTGTGG AAGAACTACT TTTGTGAAGA GGATCGAGTA TTGCAACATA TGTCACTGTC ACATTTCCAC CACCAGAAGC CAGGCTCACC ATATCAAGAC TATTTCAATT TCCTTGCCAT ATTCCTTCCG TATAAGATAT AAGTCATAGC AGACAAATTC GGAACATTTT ACATTTTTCA TCTCATCGCA TCACTTCACC TCTCGTTTAT TCGAAAGGAA CCATACTAAC ATAACAATAG AGGGTACTCC ATCTTTAGGT AAGCGTCACA ACAAGTCCCA CACTTTGTGT AACAGATGTG GCCGTCGTTC TTTCCACGTC CAAAAGAAGA CTTGTTCTTC TTGTGGATAC CCAGCTGCCA AGTTAAGATC CCACAACTGG GCTTTGAAGG CTAAGAGAAG AAGAACCACT GGTACCGGTA GAATGGCTTA CTTGAAGCAC GTTTCTAGAA GATTCAAGAA CGGTTTCCAA ACCGGTGTCG CCAAGCCTCA ATCCGCTTAA ATTAAACGCT ATCCAAGGAA CCAAACCATC CAATAATTTC ATAAAGCAAA CAATAGGGGT TGTTTTACAT TTCACATAAT TTTTTGGTTG TTGTGTTAAT ATAGTATTTA ATTTTCGTTT ATATTGAAGT TTTTACGCAA TTCAAATAAA TCATTGTATC ATAAG
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Protein sequence | MGKGTPSLGK RHNKSHTLCN RCGRRSFHVQ KKTCSSCGYP AAKLRSHNWA LKAKRRRTTG TGRMAYLKHV SRRFKNGFQT GVAKPQSA
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