| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_76038 |
|---|
| Symbol | RCF5 |
|---|
| ID | 4837139 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009042 |
|---|
| Strand | - |
|---|
| Start bp | 27941 |
|---|
| End bp | 29202 |
|---|
| Gene Length | 1262 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640388454 |
|---|
| Product | DNA replicationn factor C |
|---|
| Protein accession | XP_001382764 |
|---|
| Protein GI | 150864072 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | AAACCTTTTC TTCAATCCGT GAATTGAAAA CGTATATATA TAACTTGAGT GTACCATTCT
AGTATGTCTT TGTGGGTGGA CAAGTATAGA CCAAAGACCT TGGACCAATT GTCATTTCAT
GATTCTATTT CGCAGAACTT GAGGGCTTTG GCCAGATCTG GGGATTTTCC TCATTTGTTG
ATATATGGAC CCAGTGGAGC TGGGAAAAAG ACAAGAATAT ACGCGACTTT GAACGAAATA
TTTGGTTCTC AGGTGGAGAA ATTGAAGATC GACGTCAAGA CTTTTGTAAC TTCTTCCAAC
AGAAAGATGG AATTCAATGT ATTGAGTTCG GCCTATCACT TGGAGATCAC CCCTTCTGAT
ATGGGCAACA ACGATCGTGT GGTGATCCTG GATTTATTAA AGGATGTCGC TTCTACCGAA
CAGGTTGATT TCAGCCACCA GAATACTTCA AAGACCAAGC ATAGATTTAA AGTTGTGGTG
ATAAATGAGG CTGATTCACT TAGTAGAGAT GCCCAGGCTG CCTTAAGAAG AACAATGGAA
AAGTACTCGT CTAACATAAG ATTGATACTT GTATGTAATT CGATCTCCAA CATCATTCCT
CCCATAAAAT CGAGAACGTT ATTGGTCAGA ATACCCAGTC CCAGCACTAC AGCAATTTCC
CTGATATTGG GGCAGGTGGC CAAGAAGGAA GGAATCAAAT TCAGCTCGTC CAACGAACTT
GATATTCAAA AGTATTTGGT AACTCTTGCT GATACAGCTA ATCGAAACTT GAGAAAAGCA
CTTTTAAGTT TTGAGACCGT CGCCATGCAA AACGAAACTA TACAGCTTGA CAACAAAACG
TTGACGATTG TCACCTTGGA CTGGGAAGAA ATCATCAAGA ACATGTCCAA CACTATTAGA
ATCAACCGTA ACGTCGCTAC CTTGGCCAGT GTTCGAGTGG TTTTGTACGA ATTACTTGCT
CATTGTATCC CTCCAAGAAT AATATTGAAG ACATTAATGT TCAATTTGAT CAAGAATTTC
AAGGACGACG CTGTCATTAG CCAGTTGGTT GATTTAGGAT CTGTGTTTGA CGAAAGATTG
AGTCTTGGGC TGAAAAGCAT CTTTCACTTG GAAGGGTTTG TGGCTAAATC GATGGTGGTG
ATCGACAGCA ACTAATCACA AGTCACAATT GTATACTATT CTTATCATCG TGATCATCAT
CGCATATATT TTATCATTAT ATATCACACT TGAAAACAAT TAATAAAAGA GAAGAAAAAT
GT
|
|---|
| Protein sequence | MSLWVDKYRP KTLDQLSFHD SISQNLRALA RSGDFPHLLI YGPSGAGKKT RIYATLNEIF
GSQVEKLKID VKTFVTSSNR KMEFNVLSSA YHLEITPSDM GNNDRVVISD LLKDVASTEQ
VDFSHQNTSK TKHRFKVVVI NEADSLSRDA QAALRRTMEK YSSNIRLILV CNSISNIIPP
IKSRTLLVRI PSPSTTAISS ILGQVAKKEG IKFSSSNELD IQKYLVTLAD TANRNLRKAL
LSFETVAMQN ETIQLDNKTL TIVTLDWEEI IKNMSNTIRI NRNVATLASV RVVLYELLAH
CIPPRIILKT LMFNLIKNFK DDAVISQLVD LGSVFDERLS LGSKSIFHLE GFVAKSMVVI
DSN
|
|---|
| |